Lactococcus lactis subsp. lactis Il1403: L152588
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Entry
L152588 CDS
T00045
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lla
Lactococcus lactis subsp. lactis Il1403
Brite
KEGG Orthology (KO) [BR:
lla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lla03400
]
L152588 (sbcC)
DNA repair and recombination proteins [BR:
lla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L152588 (sbcC)
Archaeal homologous recombinant proteins
L152588 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
Nuf2_DHR10-like
SMC_N
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAK05419
UniProt:
Q9CFZ0
LinkDB
All DBs
Position
complement(1352843..1355983)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKPIYLEMNYFGPHENSVVDFRLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTGDRD
AKEMRSQFATADDRTSVTFYFKQGNLLYRIERSPEQKLSKKRGSGSTLQKSTAKLAIVDR
VKGIEKNNIAINPKNVGEEITRLLHLNAEQFKKIILLPQNDFSRFLKSSTPDKEAILKRI
FGTYIFTSFSNEIKAKNSEMNAVYLEYDRKQQNLYESSIWNPIELKELEDAAEQEKLDLV
TSLWKDRVARKNEIEGQTFEQEEKVISIEIAYKSALELENQFKNLNNLENDYQQNIIEKS
AIFEENSEYLKKLKWAFPLKESIHELEQDIKQSKSVKNNIAGIISEKAKDEILLKKLTNE
KEDLNKQQENINENKKVAEKIFIQIQLSLQVEKKQSKVEELKLEQADNLTLLESFKANLG
QAAENISTLQDDVISDDYFINKREERNQLELTFRGKLIPTFQKVKHSKDDIVGLELKLKE
NTIALSENKDNLEKAKFAYNEKLKGRRRLMIAQLQSELQEGEACPVCGALEHPFTETIEE
SSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLKTELKTSLDLKKIEADEFEKELSILYS
EFIADYSQIFPDSFDEVSIDESLLNLTKSLELEEVKNDETKVKLADLESKKLELQEKVKD
FEYSNQEFNRQIENLNAEITEIGITETSYNLIRKRNRLMEKADLFEKHLSELMAQLSDIK
IKISSQTASLNSFESQEATLLERISANKEKIKEKFSEQEAFTTEFQILKEWAYDDDLIQI
SQKVEQYKADKARLKVEIKNIQQLIQNKKRPNLALIEEEKKQTNENYVFLQKKLVSAENE
VEQAKSILSELKKVIKQQDKDASKKSAITKLYNAISGRASEDKLRLETYVVQNYLEKILD
YANLHFINQLSNNRYRFELAGEGNNRRMDHGLDINIYDNETGAARSADTLSGGETFIAAL
SIALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQIGENRLVGVISHVEE
MKATIGQRIIINKMGDGRSNIKSVIK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctatatatttggaaatgaattattttggcccccatgagaattctgtcgtagat
tttcgactgctagatgaatctcctatatttctaattagtggggacacaggcgctggaaaa
tccacgatatttgacgcgatgacatatgctttgtttggaacaacaacgggtgatagagat
gccaaagaaatgagaagtcagtttgcaacagctgatgataggacaagcgtgacattttat
tttaaacaaggaaatcttttatacagaattgaaagaagtcctgaacaaaaactctcaaag
aaacgaggcagtggatctactcttcaaaaatcaacagcgaaattagctattgtagataga
gtaaaaggaatcgagaaaaataatattgcaataaatcctaaaaacgttggagaagaaatc
actcgtcttttacatctgaatgccgaacaatttaaaaaaataattcttctacctcaaaat
gatttttcgagatttttgaagtcttctactccagataaagaggcaatattaaaaagaata
tttggtacctacatttttacatcttttagcaatgagataaaggctaaaaattcagagatg
aatgctgtttatttagaatatgatcgaaaacaacaaaatttatatgaatcatcaatttgg
aatcctattgaattaaaagaactagaagatgcagctgaacaagaaaaactggatctagtc
acgtctctatggaaggatcgtgttgcgagaaaaaatgagatagaaggtcaaacttttgaa
caagaagaaaaagtaatttcgatagaaatagcttataaatccgcgttggaattagaaaat
cagtttaaaaatctaaataatttagaaaatgattaccagcagaatattattgaaaagtca
gctatttttgaagaaaattccgaatatctaaaaaaattgaaatgggcctttcccttaaaa
gaaagtattcatgaattagaacaagatataaaacagtcaaaaagtgtaaaaaataatatt
gctgggataatttctgaaaaagcaaaagatgaaattcttttgaaaaaattaacaaacgaa
aaagaggacttaaataaacagcaagaaaatattaatgagaataaaaaagtagcagaaaaa
atatttatccagattcagctatcacttcaagtagaaaaaaaacaatcaaaggtagaggag
ttaaagttagagcaagctgataatctcacactactagaaagttttaaagctaacttggga
caagcagccgaaaatatttcaactcttcaagatgatgttatttctgatgattactttatt
aataaaagagaagagagaaatcaattagaattaacatttcgagggaaattaattccgacc
tttcagaaagtgaaacattcaaaagatgatattgttgggttagaattaaaattaaaagaa
aacacaatagcgctttctgaaaataaggacaatctagaaaaggctaaatttgcttataat
gaaaaattaaaaggtagaagacgcttgatgatcgcacagctgcaatctgagttgcaagaa
ggcgaagcatgtcccgtgtgtggtgcattagaacatccgtttacagaaactattgaagaa
agctcttataaagaacttggaaatttattgaaagagattgatgaatcacaaaagaaacaa
acagtccttttggagaaaaataaacaattacaacaattaaagactgaacttaaaactagt
cttgatttgaaaaaaatagaggcagatgagtttgaaaaagaactttcaattctttatagt
gaatttattgctgattattcacaaatatttccggattcctttgatgaagtatctattgat
gaaagtcttttaaatttaacgaaatcgttagagttggaagaggtaaaaaatgatgaaaca
aaagtaaagcttgctgatttggagtcaaaaaaacttgaattacaggaaaaagtaaaagac
tttgaatatagtaatcaggagtttaatagacagatagaaaatttaaacgctgaaataacg
gagatagggattactgaaacaagttataatttgataaggaagcgaaataggctaatggaa
aaagctgatttatttgaaaaacatctgtcagaactaatggcacaactttcagatattaaa
ataaaaatttcttcacaaacggccagcttaaattcatttgaaagtcaagaagcaacatta
cttgaaaggataagcgccaataaagaaaaaataaaagaaaaattttctgagcaagaggca
ttcacgacagaatttcaaatattaaaagagtgggcttatgatgatgatttaattcagatt
tcccaaaaagttgaacaatataaagcagataaagcaagattgaaagtcgaaattaaaaat
attcagcaattaattcaaaataaaaagcgaccaaatcttgcattgattgaagaagaaaaa
aaacagacaaatgaaaactatgtttttttgcaaaaaaaattggtgtctgctgaaaatgaa
gtagagcaagcgaagtcaattcttagtgaattaaaaaaagtcataaaacaacaagataag
gatgctagcaaaaaatctgcaattactaagctttataatgcaatttcaggtagagcttcc
gaagataaactaaggcttgaaacatatgtggttcaaaattatttagaaaaaattcttgat
tatgctaaccttcattttattaatcagttgtcaaacaatagatatcgatttgaacttgct
ggcgagggaaataatcgacgaatggatcatggcttagatattaatatttatgataatgaa
acaggggcggctcgttcagctgataccttatcgggtggagaaacatttatagccgcattg
tcaattgctttggctttaagtgaagtcgtacaaaatacagctaatggtgtccaaatagaa
gcactatttattgatgaaggatttggttctcttgaccaagaaacattacaaaaagcaatg
caagctcttgaacaaattggtgaaaatagattagttggagtaattagccatgtagaggaa
atgaaagcaactattggacaacgaattatcataaataaaatgggggatggtagaagtaat
attaaatctgtcattaaataa
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