KEGG   Lentilactobacillus laojiaonis: LHL71_01095
Entry
LHL71_01095       CDS       T08206                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
llao  Lentilactobacillus laojiaonis
Pathway
llao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:llao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LHL71_01095 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llao03021]
    LHL71_01095 (rpoC)
   03400 DNA repair and recombination proteins [BR:llao03400]
    LHL71_01095 (rpoC)
Enzymes [BR:llao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LHL71_01095 (rpoC)
Transcription machinery [BR:llao03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LHL71_01095 (rpoC)
DNA repair and recombination proteins [BR:llao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LHL71_01095 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: UDM32357
LinkDB
Position
222463..226113
AA seq 1216 aa
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDSGNTPMENKQLLSEREYRDKKREYGPRFEAQVGAEAIKTLLN
NVDVEKEVAELKEELKNATGQKRTRAVRRLDILEAFVNSDNELSWMVMDTIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPNLKMNQMGLPVP
MAMELFKPFIMKELVSRGLASNIKNAKRKIERQDDDVFGVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVSGKAMRLHPLVCEAYNADFDGDQMAIHVPLSDEAQAESRLLMLAAGHIL
APKDGKPVVAPSQDMVIGNYYVTTEESGREGEGMIFNSPSEVELAYRNGLVHWHTRIGIK
TAFYEQKPFTDEQRDKIMVTSAGKVMFNMILPDGFPYLNEPTVTNLNGYVPDSYFLDAGE
DIHEHLKNTKIVPPFKKGFLSDIIAEVYKQYKVTETSLLLDRMKDLGYNDSTKSGLTVGI
ADIIELPEKQAIIDDAHKKVSMVTKQFRRGLITDQERYERVIGIWNDAKDEIQGKLMESF
DSYNSVFMMSDSGARGNVSNFTQLAGMRGLMAAPNGEIMELPITSNFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLTVHSIAEGNEMIEPLF
DRIVGRYAMKSVINPNNGEVVVAANQMIDEEMAQQIDDLGIEKVTIRSAFTCNTVHGVCE
KCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNADITQGLPRVQEI
FEARNPKGKAEITEVTGTVESIEENPAEGTKSITIKGDADTRNYTVNINARMRVTEGDFI
RRGSALNDGSVDPKELLKVRDVLSTENYLLHEVQKVYRMQGVEVSDKHIEIMIRQMLRKV
RIMDPGDTELLPGTLMDINDFKLSNADMVVSGGIPATARPVILGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMADYRGIKPEEIGKSLTEGVYS
ISELEARMKAEEENSK
NT seq 3651 nt   +upstreamnt  +downstreamnt
gtggtcgacgttaataaattcgaaagtatgcaaatcggactagcatctcctgataaaatt
cgtagttggtcatatggtgaagttaaaaaaccagaaactatcaactatcgaactttaaaa
ccggaaaaagatggtttgtttgatgaacgaatctttggaccaactaaagattgggaatgt
gcctgtggtaaatacaaacgtatccgttataaaggaatcgtttgtgatcgatgtggtgta
gaagttactaaatcaaaagttcgtcgtgaaagaatgggtcatattgaattagctgctccc
gtaactcacatttggtatttcaaaggaattccaagtcgtatgggattagttttagatatg
agtcctcgtgcacttgaagaaattatttattttgcatcatatgttgttaccgattcaggt
aatacaccaatggaaaataaacaattactttctgaacgtgaatatcgtgataagaaacgc
gaatatggtccacgttttgaagcacaagttggtgctgaagcaattaaaacattgttaaac
aatgttgatgttgaaaaagaagttgctgaattaaaagaagaattaaaaaatgctactggt
caaaaacgtactcgtgcagtacgtcgtttagatattttagaagcatttgttaattcagat
aatgaattatcatggatggtaatggataccattccagttattccacctgatttacgtccg
atggttcaacttgaaggtggccgttttgctacctcagatttaaatgatctttatcgtcgt
gtaattaaccgtaataaccgacttaagagattactagacttaaatgctcctggaattatc
gttcaaaatgaaaaacgtatgcttcaagaagctgtggatgcattgattgataatggacgt
cgtggccgtccagttgctggaccaggtaaccgtccattgaaatctctttctcacatgctt
aaaggtaagcaaggacgtttccgtcaaaacttattaggtaaacgtgttgattattctgga
cgttcagttattgatgttggtcctaacttaaaaatgaaccaaatgggacttcctgtgcct
atggctatggaattattcaaaccatttatcatgaaagaattagttagtcgaggattagct
tctaacattaagaatgctaaacgtaagattgaacgtcaagatgacgacgtattcggtgtc
ttagaagatgtaattaaagaacacccagtcttattaaaccgtgcccctacacttcaccgt
cttggtattcaagcctttgaaccaacattggttagtggtaaagctatgcgattacatcca
ttggtttgtgaagcttataatgcggatttcgatggagaccaaatggctattcacgttcca
ctatctgatgaagctcaagctgaatcaagattattgatgctcgctgctggtcacattttg
gcaccaaaagatggaaaaccagttgtggcaccttctcaagatatggttattggtaattac
tatgtaactactgaagaatctggtcgtgaaggtgaaggtatgatcttcaactcacctagt
gaggttgaattagcatatcgtaatggtttagttcactggcatactcgtattggtattaag
acagccttttatgaacaaaaaccatttactgatgaacaaagagataaaattatggttact
tcagctggtaaggttatgtttaacatgatccttcctgatggcttcccatatttaaatgaa
cctactgtaactaacttaaatggttatgttccggatagctatttcttagatgctggtgaa
gatattcatgaacaccttaaaaatactaaaattgttcctccatttaagaaaggtttctta
agtgatattattgctgaagtttacaagcaatataaagttactgagacttcattattactt
gatcgcatgaaagatcttggatacaatgactcaactaaatctggacttactgttggtatc
gctgatattattgaacttccagaaaaacaagcaatcattgatgatgctcacaagaaagta
agcatggtaactaaacaattccgtcgaggattaattactgatcaagaacgttatgaaaga
gttattggtatctggaatgacgctaaagatgaaattcaaggcaaattaatggaaagtttc
gattcatataactcagtctttatgatgagtgattcaggagctcgtggtaacgtatcaaac
tttactcagcttgctggtatgcgtggattgatggccgctcctaatggtgaaatcatggaa
ttgccaatcacttcaaacttccgtgaaggactttctgttttggaaatgtttatttctacc
cacggtgctcgtaaaggtatgactgatacggcccttaagactgccaactcaggatatctt
actcgtcgattggttgatgtggctcaagatgttattgttcgtgaaaaagactgtggaact
gatcgtggtttaacagttcattcaattgctgaaggtaacgaaatgatcgaaccattattt
gatcgtattgttggtcgttatgcaatgaaatcagttattaatcctaataatggtgaagtt
gtagttgccgcaaatcaaatgattgatgaagagatggcacaacaaattgatgatttagga
attgaaaaagtaactattcgttcagcattcacttgtaatactgtccatggggtttgtgaa
aaatgttatggtcgtaatatggctactggtgacgaagttgaagttggtgaagcagttggt
acagttgctgctcaatcaattggtgaaccaggtactcaattaaccatgcgtaacttccat
accggtggtgttgctggtaacgccgatattactcaaggacttcctcgtgttcaagaaatt
tttgaagcacgtaatccaaaaggtaaggcagaaattactgaagttactggtacggttgaa
tcaattgaagaaaatcctgctgaaggaactaaatcaatcactattaaaggtgatgcagat
acaagaaactatactgttaatattaatgctagaatgcgcgttactgaaggtgacttcatt
cgccgtggttctgcattaaatgatggttctgttgatcctaaagagttattgaaagttcgt
gatgttttatcaacagaaaattacctattgcatgaagtacaaaaagtttaccgtatgcaa
ggggtagaagtttctgataaacatatcgaaattatgattcgtcaaatgcttcgtaaagtt
cgtattatggatccaggtgatactgaacttctaccaggtactttgatggatatcaatgac
ttcaaactaagtaatgcagatatggttgtttcaggcggaattcctgcaactgcacgacca
gttatcttaggaattactaaagccgctcttgaaactaacagtttcttatcagctgcttca
ttccaagaaactactcgtgtacttactgatgctgcaattcgtggtaagaatgatccactt
gtcggattaaaagaaaatgttatcatcggtaagcttatccctgctggtacaggaatggct
gattatcgtggtatcaaaccagaagaaattggtaaatctttaactgaaggcgtatattca
attagtgaacttgaagcgcgcatgaaagctgaagaagaaaattctaaataa

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