Lentilactobacillus laojiaonis: LHL71_01935
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Entry
LHL71_01935 CDS
T08206
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
llao
Lentilactobacillus laojiaonis
Pathway
llao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHL71_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llao03019
]
LHL71_01935
Messenger RNA biogenesis [BR:
llao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHL71_01935
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
UDM32499
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All DBs
Position
complement(365273..366970)
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AA seq
565 aa
AA seq
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MKKLNVKNNEAAIYGVGGLGEIGKNTYGIQFQDEIILIDAGIKFPEDELLGVDYVIPDYQ
YIVDNKDKIKALVITHGHEDHIGGVPYLIKALNVPIYAGPLAIALIKNKLEEHGLLNSVE
LHEINESTVLKFRKTKVSFFRTTHSIPDTLGIAVHTPVGVIVETGDFKFDLTPVTNTPPD
LQAMAKLGAEGVLCLMSDSTNAERPVWTKSEKWVANSIERIFDKVEERIIFATFASNISR
IKTACENALAHHRKIAVFGRSMEAAIVNGRELGYLDIPEDAFVDSSQLQSLPANKTMILC
TGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTTSVNSVINKLEEAGATVIH
GKVNNIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAAQCGVPLENSFIMQ
NGDVLALSKDTARVAGHFQAGDVYIDGNGIGDIGNVVLRDRQLLSEEGIVVVVATINLNN
QEIQSGPDILSRGFVYMRESGELLDEGRRLVFKTIRKAMRNKKVTESSIRTAIIDDLQEF
LYNKTERHPVILPMLIMNDSSNHKG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaaacgtcaagaataatgaagctgcaatctatggcgttggtggtttagga
gaaattggtaaaaacacttatggtattcaatttcaagatgaaattattttaatcgatgct
ggtattaagtttccagaagatgaattattaggtgtagactacgtaattccagattatcaa
tatatcgttgataacaaggataaaatcaaagctttagtaatcactcacggacacgaagat
catatcggtggtgtcccttacctaattaaagccttgaacgttccaatttatgctgggcca
ttagccattgcacttataaaaaataaattagaagaacatggtttattaaattcggttgaa
ttacacgaaattaatgaaagtaccgttcttaaatttagaaaaacaaaggtctcgtttttc
agaactactcactcaatccctgatacattaggaattgctgtgcatactccggttggtgta
attgtagaaactggggactttaaatttgatttaactccagttactaataccccaccagat
ttacaggctatggctaaactaggtgctgaaggtgttttatgtttaatgtctgacagtact
aatgctgaacgcccggtatggactaaatctgaaaaatgggttgctaattctattgaaaga
atttttgataaggttgaagaacgaattatcttcgctaccttcgcatcaaatatatcacgt
attaaaactgcgtgcgaaaatgctttagcacatcaccgtaaaatcgcagtatttggtcgt
agtatggaagctgccattgtaaatggtcgtgaactaggatatctagatattcctgaggat
gcttttgttgatagctctcaattacaatcacttccggctaataaaacgatgattttatgt
actggttcgcaaggtgaaccaatggctgccttatcaagaatcgctaatggaactcaccgt
caaatttctatccaacctggtgatactgttatcttttcaagtaacccaattccaggaaat
accactagtgtaaatagtgttattaataaactagaagaagctggagctacagttattcat
ggtaaagttaataatatccatacttctggacacggtggacaagaagaacaaaaactaatg
cttagattaatgaaacctaagttctttatgccaattcatggtgaatatcgaatgcttaaa
attcatactgaattagctgcccaatgtggtgtacctctagaaaatagttttattatgcaa
aacggtgatgttttagcactttctaaggatactgcccgagtagcaggacatttccaagct
ggcgatgtttacattgatggtaatggaattggagatattggtaacgtagttttacgtgac
cgtcaattattgtccgaagaaggaattgtagttgtagtagccactattaatcttaataat
caagaaattcaatctggacctgatattttatctagaggttttgtatacatgcgagaatct
ggtgaattattggatgaaggccgtcgattagtatttaagactatacgtaaagccatgcgc
aataaaaaagtcacggaatcatcaattcgtactgcaattatcgatgacttacaagaattt
ttatataataaaactgaacgccaccctgtaattttgccaatgctgattatgaacgacagc
agcaatcataaagggtag
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