Lentilactobacillus laojiaonis: LHL71_03400
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Entry
LHL71_03400 CDS
T08206
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llao
Lentilactobacillus laojiaonis
Pathway
llao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHL71_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llao03019
]
LHL71_03400
03400 DNA repair and recombination proteins [BR:
llao03400
]
LHL71_03400
Enzymes [BR:
llao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHL71_03400
Messenger RNA biogenesis [BR:
llao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LHL71_03400
DNA repair and recombination proteins [BR:
llao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LHL71_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
UDM31601
LinkDB
All DBs
Position
complement(646050..647501)
Genome browser
AA seq
483 aa
AA seq
DB search
MKSEIELKKILKERFSFDEFKPGQLEILQSLFNQQDTLAILPTGGGKSLIYQFYGEIMQP
RILIVSPLISLMQDQVNRMNYLGIKKAITINSSLDFSYRNYVIKNLDRYQYIFVSPETLS
NNQVINRLMEVGIDLLVIDEAHCISQWGPDFRPEYLNLGQVKTDLGDPLTLMLTATANEK
TRFDILNGLGFDKKRVKIIVNSIDRPNLFINCVDVHDENQKDETLFSILNKLNGSGIIYF
SSKSKAEQVSQLINENTNKASLPYHGGMDALQRFKIQQQFMKDEIEIICATSAFGMGIDK
SNVRFVIHYHFPANIQDYYQEIGRAGRDQLPCVSILLFNYSDINIHNGLIDNTYPDSSLI
HYAYTHPNLLETFKDEKSQLIKFYYDHDYSELDLIELFKQRKSQKQQQLNQMLEYIQYQG
CKREWLLNYFGDKKKHDLEFCCNNDSLFNNYLLVSDKLFETGHRTNQSMNWQDKLKKIFL
LKN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtgaaattgaacttaaaaaaatattaaaagaacgtttttcctttgatgagttt
aaaccaggtcaacttgaaattttacaatcattatttaatcagcaagatacgttagcgatt
ttaccgactggcggtggtaaaagcctaatttatcaattttatggcgaaattatgcagcct
cgaatattgattgtttcaccattaatttctttaatgcaggaccaagttaaccgtatgaat
tatttagggataaaaaaggcgattactatcaattctagtttggattttagctatagaaat
tatgtaattaaaaatttagataggtatcaatatatttttgtttcacccgaaactttaagt
aataatcaagtaattaatcgtttgatggaagtaggaattgatcttttagttattgatgaa
gctcattgtatctctcaatggggacctgattttcgtccagaatatttaaatttaggtcag
gtaaagacagatttgggtgatccattgaccttaatgttaactgcaactgctaatgaaaag
actagatttgatattttaaatggacttggttttgataaaaaaagggtaaaaataattgtt
aattccattgatcggcccaatttatttataaattgtgttgatgtccatgatgaaaatcaa
aaagatgaaactttatttagtatattaaataaattaaatggatctggaataatttacttt
tctagtaaatcaaaagctgagcaagttagccagttaattaatgaaaatactaataaagct
agtttaccttatcatggtgggatggatgctctacagaggtttaaaattcagcaacagttt
atgaaagatgaaattgagataatctgtgctactagtgcatttggaatgggaattgataag
tccaatgttaggtttgttattcattatcattttcccgctaatattcaagactattatcaa
gaaattggtcgagcgggtcgagatcagttaccatgtgtatcaattttattgtttaactat
tctgatattaatattcataatggtttaattgataacacctatccagacagtagtttaatt
cattacgcttacacccatcctaatttacttgaaacatttaaggatgaaaaatctcaattg
ataaaattttactatgatcatgattattcggaattggatttaattgaattatttaagcaa
cgaaagtcacaaaagcagcagcagctaaatcagatgcttgaatatattcaataccaaggt
tgtaaacgagaatggctattaaattattttggggataaaaagaagcatgatttagagttt
tgttgcaataatgatagcttatttaataattacttattagtttctgataagttatttgaa
actggtcacagaaccaatcagtcaatgaattggcaagataagcttaaaaaaatattttta
ttaaaaaattaa
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