Lentilactobacillus laojiaonis: LHL71_05165
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Entry
LHL71_05165 CDS
T08206
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
llao
Lentilactobacillus laojiaonis
Pathway
llao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHL71_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llao03019
]
LHL71_05165
03009 Ribosome biogenesis [BR:
llao03009
]
LHL71_05165
Enzymes [BR:
llao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LHL71_05165
Messenger RNA biogenesis [BR:
llao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LHL71_05165
Ribosome biogenesis [BR:
llao03009
]
Prokaryotic type
rRNA helicases
LHL71_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UDM31925
LinkDB
All DBs
Position
complement(985959..987524)
Genome browser
AA seq
521 aa
AA seq
DB search
MKFSELNLSDHILSAIEKSGFEEATPIQAETIPLVLEGNDVIGQAQTGTGKTAAFGLPIL
EKIDLKDPKVQALVISPTRELAIQTQEELYRLGKDEGAKVQAVYGGSDIRRQINSLKNHP
QIVVGTPGRILDHIRRRTLKLEDLKFLVLDEADEMLDMGFLEDIESILKETPASRQTLLF
SATMPAGIKRVAVQFMRDPKQVKIKAKELTTDLIEQYYVKVKEFEKFDTMTRFFDVQSPE
VTIVFGRTKRRVDEVSKGLEARGYKAAGLHGDLTQARRSQIMREFKNGKIDFLVATDVAA
RGIDISGVTHVYNYDIPQDPDSYVHRVGRTGRAGKKGISVTFATPNEMDYLREIEKLTKV
RMLPLKPPTKEEAIVGQLSSAESEVADLVQKTDTSIYKDTADKLLTEYDAVDLVATLLNQ
LTGDSDVKVKITPERPLPSRHRKSNGGRRRNDRRGGGYRGGRGNGGDRRRNGNGDRRNND
RRGGNNDRRNNGNGNRRRNDNNDRKRNNDRPKKNFTIKNND
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttagtgaattaaatctatcagaccatattttatcagcaattgaaaaaagtggt
tttgaagaagcaaccccaatccaagcagaaactattccattggtactagaaggaaatgac
gttatcggacaagcccaaactggtaccggtaaaaccgcagcctttggtttaccaattctt
gaaaaaattgatttaaaagaccctaaggtacaagcattagttatttcaccaactcgtgaa
ttagctatccaaacccaagaagaattatatcgcttaggtaaagatgaaggtgccaaggtg
caagcagtttatggtggttctgatatcagacgccaaattaactcacttaaaaatcaccca
caaattgtggttggtactcctggtcgtattttagaccacattagaagacgtactttaaaa
ttagaagatcttaaatttttagttctagatgaagctgacgaaatgttagacatgggattc
ttagaagatattgaatcaattcttaaagaaactcccgcatctcgccaaactcttttattc
tcagcaactatgccagctggtatcaaacgtgtagctgttcaatttatgcgtgatcctaag
caggttaaaattaaagctaaagaattaactactgacttaattgaacaatactatgtaaaa
gtaaaagaattcgaaaaatttgatacaatgactcgtttctttgatgttcaatctcctgaa
gttactattgttttcggtcgtactaaacgccgagttgacgaagtttctaaaggacttgaa
gctcgtggctataaagctgccggtttacatggtgatttaactcaagctcgccgatcacaa
attatgcgtgaatttaaaaacggtaagattgatttcttagtagctactgacgtggctgcc
agaggtattgatatttctggagttactcatgtttataactatgatattcctcaagaccca
gacagttatgttcaccgtgttggtcgtactggccgtgccggtaaaaagggtatttcagta
acttttgctactccaaatgaaatggattatctaagagaaattgaaaaattaactaaggtg
cgtatgctcccattaaaaccacctactaaagaagaagctattgttggtcaattaagctca
gcagaaagcgaagttgctgacttagttcaaaagactgatactagcatctataaagatact
gctgataaattgttgactgaatacgatgcagttgatttagtagcaactttattaaaccaa
cttactggtgattctgacgttaaggttaaaattactccagaacgtccattaccatcaaga
caccgtaagagcaatggtggtcgtcgtcgcaatgatcgtcgtggtggtggctatcgcgga
ggtcgtggtaatggtggagaccgtcgtcgtaatggcaatggtgatcgccgtaataatgac
cgtcgtggtggcaacaacgatcgtcgtaacaatggtaacggtaatcgtcgtcgcaatgat
aacaatgatcgcaaacgtaacaacgatcgaccaaagaaaaactttacaattaaaaataac
gattaa
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