Lysinibacillus louembei: R6U77_03040
Help
Entry
R6U77_03040 CDS
T09574
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
llb
Lysinibacillus louembei
Pathway
llb03420
Nucleotide excision repair
llb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R6U77_03040 (helD)
03430 Mismatch repair
R6U77_03040 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llb03400
]
R6U77_03040 (helD)
Enzymes [BR:
llb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R6U77_03040 (helD)
DNA repair and recombination proteins [BR:
llb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R6U77_03040 (helD)
MMR (mismatch excision repair)
Other MMR factors
R6U77_03040 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_30
DEAD
SLFN-g3_helicase
AAA_11
ResIII
Myb_DNA-binding
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
WPK12692
LinkDB
All DBs
Position
633931..636150
Genome browser
AA seq
739 aa
AA seq
DB search
MQHPDYQDEVQRLERTKAYMYDILSTSEHDLQAAQQNIRSAMANLEYLDSSDSFLNILTN
ARFFEMARTQKEGLEAVMQKPYFARIHFQRTDEQEEFLYIGKTSLFDKDTNEPIIIDWRS
PVANVYYDGRLGDVTYQVRDEEHEGHLFAKRQYKIEQGELLDFRDVDLTTNDELLQEALA
GKADVRLTEIVSTIQKEQNEIIRAHLRQPILVQGAAGSGKTTIALHRISYFLYTMGEHFK
PEQLMILAPSQLFIEYIGDVLPELGVDKICQTTYADYVQNAIGIKLKLQNPNEQLEHIIE
NSSATLPAFSIPQAKGSLGYRAIMERYVHRYEEQLASMFEDVSIEKYRIIRGTHLQKLFL
QEFAYMPIEKRLERIKLVIQTEVKRKTTAILNSLNARYEEAIGRALNGIRNAENRRRIVT
KYIDERDARIPRVKAEAKTTTSAYMKRFSKLKIKAAYRDIVTNRPLLQELALEWTLDEQE
LFLQAHQKERWAFEDLAALYYLHARIKGIDDKWKMRVVFIDEVQDYSIFQLAALKVGLET
DMFTMVGDLAQGIHSYRSVTEWNPVLELFPRATYATLQKSYRTTIEIMEVANKVLAQMDE
DLPLVEPVVRHGKEPAFIQAQAFDAATIAELYASIQAAGHRSIALICKTTKEAKEFVTLL
QAHAVNAAELNEHSSINQTTLLVVPCHLAKGLEFDAVIIAAFDIAFYDHAIDRKLLYVAL
TRAMHELYLVGPSKETFLL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcctgattaccaagatgaagtacaacggttagaacgaacaaaagcctatatg
tatgatattttatcgacatctgaacatgatttacaggcagcacagcaaaatattcgctct
gctatggcgaatcttgaataccttgactctagtgatagttttttgaatattttaaccaac
gcacgctttttcgaaatggctcgtacacaaaaagaaggattagaggccgttatgcaaaag
ccttattttgcacgcatccatttccaacgtactgatgagcaagaggaatttttatatatt
ggcaaaacctcattattcgacaaggatacgaatgagcctattatcatcgattggcgctcg
cctgttgccaatgtttattatgatgggcggttaggcgatgttacatatcaagtgcgcgat
gaggagcacgagggacatttatttgcaaagcggcaatataaaattgagcaaggagagctg
ctcgattttcgcgatgtcgatttaacgacaaatgatgaactgttacaggaggcattagct
ggaaaagcggatgtgcgcttaacggaaattgtttctaccattcaaaaggagcaaaatgaa
attattcgtgcccatttgcgtcagccgattttagtgcagggcgctgcaggtagtggaaaa
acgactattgcgctacaccgcatttcctattttctttatacaatgggcgagcatttcaag
cctgagcagctcatgattttagcaccaagccaattgtttatcgaatatattggcgatgtt
ctgccagagctaggtgtcgataaaatttgtcaaacaacatacgctgactatgtgcaaaat
gcaattggtatcaagctaaagctgcaaaatccaaatgagcaattagagcatattatcgaa
aatagtagcgccacacttcctgccttttctattccacaggcaaagggctcacttggctat
cgtgctataatggagcgctatgtgcatcgctatgaggagcagctcgcctctatgtttgaa
gatgtatctatcgaaaaataccgcattatacgggggactcatttacaaaagctcttttta
caggaatttgcttatatgccgattgaaaaaaggttggagcgtattaaattagttattcaa
acagaggtcaaacgcaaaacgactgccattttaaattcattaaatgcacgctatgaggaa
gccatcggacgtgctttaaacgggatacgcaatgccgaaaatcgccgacgtattgtgaca
aaatacattgacgaacgcgatgcacgcataccaagagtaaaagcagaagctaaaacaaca
acatctgcctatatgaaacgttttagcaaattaaaaataaaagctgcttaccgcgatatt
gtgaccaatcgtccattgttgcaggagcttgctcttgaatggacgctagatgaacaggag
ctgtttttacaggcacatcaaaaagagcgctgggcattcgaggatttagctgcactgtac
tatttacatgcacgtattaaaggaattgacgataagtggaaaatgcgcgttgtctttatt
gatgaggtgcaggactacagcatattccagctcgctgctttaaaggtagggcttgaaacg
gatatgtttacaatggttggtgatttagcacaaggtattcatagctaccgttctgtgaca
gaatggaatcctgtgcttgagctattcccaagagcaacatacgctactctacaaaaaagc
tatagaacgacaattgaaattatggaagtagccaacaaagtattagcacaaatggatgag
gatttgccattagttgaacccgttgttcgtcatggaaaagagccagcctttatacaagcg
caggctttcgatgcagcaactattgcagagctctatgcatcaattcaagcagcaggacat
cgctctatcgcacttatttgtaaaacgacaaaggaggcgaaggaattcgtcacattgcta
caagcccatgctgtaaatgcggcagagctcaatgaacattctagtattaatcaaacgaca
ctgcttgtcgtcccttgtcatttagcaaaaggacttgaattcgatgcagtcattatcgcc
gcttttgatatcgccttttacgaccatgccatcgaccgtaagctactatacgttgcttta
acgcgtgcgatgcatgagctatatttagttggtccatcaaaggaaacgttcttattataa
DBGET
integrated database retrieval system
