Lysinibacillus louembei: R6U77_05430
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Entry
R6U77_05430 CDS
T09574
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
llb
Lysinibacillus louembei
Pathway
llb03420
Nucleotide excision repair
llb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R6U77_05430 (helD)
03430 Mismatch repair
R6U77_05430 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llb03400
]
R6U77_05430 (helD)
Enzymes [BR:
llb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R6U77_05430 (helD)
DNA repair and recombination proteins [BR:
llb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R6U77_05430 (helD)
MMR (mismatch excision repair)
Other MMR factors
R6U77_05430 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PhoH
SLFN-g3_helicase
AAA_22
AAA_30
nSTAND3
AAA_16
DEAD
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
WPK13130
LinkDB
All DBs
Position
1109817..1112114
Genome browser
AA seq
765 aa
AA seq
DB search
MNLLFQQQQKHVNGVMKTIASQMNRLEKEASQRQSDVMNIRKHFWDEVKVNTDTFDDFLE
TIIGLRQEAQALAVSQSTHQHAAKRLDVLQRMQNIPYFGRIDFTEQGHSATEQIYIGISS
LMDEGGEDFLIYDWRAPISSVYYDYQPGPAQYKTPEGIIYGQLEKKWQYLIRAGELQSMF
DTSLTIGDEILQQVLGKGTDKYMHSIVATIQQEQNRIIRHDKGRLLVVHGAAGSGKTSAA
MQRVAYLLYKYRDSLNAEQIILFSPNAMFNSYVSNVLPELGEENMQQVTFQEYLNHRLSK
EFQIENPYDQLEYLLTTMDTATRVAAIQFKASVRFFEVIKSYKESLGLSGMLFQDIMFRQ
KSIVTAKEIAAHFYSYETSLKFHHRLEKTKNWLLTQVKEFEKREWSRPWVEDEIELLSNE
EYHKAYVYLAKKKGFNRDSVTDYEMEPKMLARLLVHQKLKPLKKRIAALHFIDMKGIYQQ
LFTDTALMQKLLEERLPLMWEAICQITVDTLEEDKLFYEDATPFLLMKELIQGFQTNLSI
KHIFIDEAQDYSPFQFEFIKRLFPIAKMTVLGDFNQAIFTHASGVVNFDVLQHLYGQEEM
EVINLAQSYRSTKPIIEFTRQLIPQGEHIIPFDRDGEQPVVTQVANEEELHLDIKAKVEE
LKGLGYQSIAIICQSAAESKHAYEALTAIEDIILLKNSSPKYEQGVVVIPAYLAKGIEFE
AVIIYNASVYRDESVRRLFYTACTRAMHCLQLYSVGQPSSFLQKE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattatttcaacaacaacaaaagcatgtaaatggtgtgatgaagacgattgca
tcacaaatgaatcgactggagaaggaggcttcgcagcgacaaagtgatgtgatgaatatt
cgtaagcatttttgggatgaagtgaaagtgaatacggacactttcgatgattttcttgaa
acgattattggattaagacaggaagcgcaagcattggcagtcagtcaaagcacccatcag
catgctgcaaaaaggttggatgtattgcagcgtatgcagaacattccttattttgggcga
attgattttacagagcaaggacatagtgctacagaacaaatttatattggaatctcgtca
ttgatggatgaaggtggggaggatttccttatttatgattggcgagcacctatttctagc
gtatattacgattatcagccaggacctgcgcaatataaaacaccagaaggcatcatctat
ggtcagctggagaagaaatggcaatatttaattcgtgcgggtgagcttcaatctatgttt
gatacaagtctaacgataggtgatgaaattttacagcaagttttaggtaaaggcacagat
aaatatatgcatagcattgtggcaacaatccagcaggagcaaaatcgcattattcgtcat
gacaaaggtagattgcttgttgtacacggtgcggctggtagtgggaaaacatctgctgca
atgcagcgtgttgcctatttactatataaataccgcgacagcttgaatgcagagcaaatt
attttattttcaccgaatgcgatgtttaatagctatgtatcgaatgtactaccagagctt
ggggaagaaaatatgcagcaggtgacatttcaagaatatttaaatcatcgattgagcaaa
gagtttcaaattgaaaacccttatgaccaactggaatatttattgacgacaatggataca
gctacaagggtcgcagctatccaatttaaagcatctgtacgcttttttgaggtgattaaa
tcttataaggaatcgctggggctgtcgggtatgctgtttcaagatattatgtttagacaa
aaatctatcgtgacagcaaaggaaatcgctgcacatttttatagctatgaaacatcattg
aaatttcatcatcgtcttgaaaaaacaaagaattggctgctaacgcaagtgaaggaattt
gaaaagcgagagtggtcaaggccttgggtagaggatgaaatcgagctgttgagcaacgaa
gaatatcataaagcttatgtttatttagcgaaaaagaaaggctttaatcgcgattcagta
acagattatgaaatggagccaaaaatgctagcaaggcttttagtccatcaaaaattaaag
ccattgaaaaagcgcattgctgcattgcattttattgatatgaagggtatttatcagcaa
ttatttacagatacagcactgatgcaaaaattgctagaggagcgcttgccactaatgtgg
gaggcaatttgtcagataacagtggacacattagaagaagataaactattttatgaggat
gcgacaccatttttattaatgaaagagttgattcaaggctttcaaacgaacctgtccatc
aagcatatttttattgatgaggcacaggattactcaccgtttcaatttgagtttattaag
cgtttattccctattgctaaaatgacggtgttaggggattttaatcaagcgatttttaca
catgcgagtggtgtagtcaattttgatgtgctgcagcatttatatggacaagaggaaatg
gaagttatcaatttggcgcaaagttaccgctcaacaaagccaattattgaatttacacgt
cagctcattccacaaggtgagcacattattccttttgatcgtgatggagagcagcctgtt
gtgacacaagtagcgaatgaggaggagctacatctcgatatcaaggcgaaggttgaagag
ctgaaaggcttaggctatcagagcatagcaattatctgtcaatcggcagcggaaagtaaa
catgcatatgaagcattaacagctattgaagatatcatcctgttaaaaaatagctcacca
aagtatgagcaaggtgttgtcgttattccagcatatttagcgaagggcattgagtttgag
gcagtaattatttataatgcatcagtgtatcgagatgaaagtgtgcgtcgacttttttat
acagcttgtacgagagcgatgcattgcttacagctatatagtgtagggcagccaagctcc
tttttacagaaggagtag
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integrated database retrieval system
