Lysinibacillus louembei: R6U77_13185
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Entry
R6U77_13185 CDS
T09574
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
llb
Lysinibacillus louembei
Pathway
llb03410
Base excision repair
llb03430
Mismatch repair
llb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R6U77_13185 (recJ)
03430 Mismatch repair
R6U77_13185 (recJ)
03440 Homologous recombination
R6U77_13185 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llb03400
]
R6U77_13185 (recJ)
DNA repair and recombination proteins [BR:
llb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
R6U77_13185 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R6U77_13185 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
R6U77_13185 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TraI_2B
Motif
Other DBs
NCBI-ProteinID:
WPK10834
UniProt:
A0ABZ0RUV5
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All DBs
Position
2642895..2645195
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AA seq
766 aa
AA seq
DB search
MASINKKWVIQRPNEQHVEHLQKQLKLSPIAAKILVARGCQTVEQAQKILSMDEQAIHDP
FLLHNMDKAVARIEQALEAGEKILIYGDYDADGITSTTVMLHTLLDLGADVDFVIPNRFA
HGYGPNEQLFREAHEKGVQLIITVDNGISGIEPIRVAKELGMDVIVTDHHEAGEVLPPAD
VIIHPRVPEGHYPFGELAGVGVALKVAHALYGEIPTHLYELAAIGTIADLVPLVDENRYI
VKQGIKHLRQSQSPWVEAFCKVASAKQAEINEETIGFYFGPRLNAIGRLGDAMPGVHFMK
SEDMETAKELAELLNSKNAERKNIVATITEEAVAMIESDDKLKNAHVLVVAQEGWNPGVV
GIVASMLVEQYYRPTIVLSLDTEKGTAKGSARSIEGFHLFNELAKNRDILPHFGGHPMAA
GMTLAAAHVEQLQMRLNEQAKACLTEEQLIPKLTIDIPLELSEITVEAIEEIGQLGPFGT
DFPKPVFALEQVKVSAMRKIGANENHLKLELDDGYCTMDAVGFNKGYLFNEISYGVALSF
VGDLQINEWQNRKKPQFMVQDVQSNEWQLFDLRGKKQLVNIPQEETLFVVFDKQLVPYFE
QHVPVTLAEQIVGQKPYVAVLDLPPNEERLAELLQRLQPQRIYAHFYTASSQYFSGMPTR
QHFSWYYGFLKKRPNFALQQHIEPLAKHIGLNIDVINFMTKVFFELGFVTIENGLTTVVE
SAPKQALETAPSYKERSAQIQLEQKLLYATYSELKQWLDGQMSRED
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtataaacaaaaaatgggtaatccaacgcccaaatgaacagcatgtagagcat
ttgcaaaagcaattaaagctatcgccaatcgcggcaaaaattttagtagcacgtggctgc
caaacggttgagcaagcacaaaaaatattatcaatggatgaacaggccatacatgatcca
tttttattacataatatggacaaagcagttgcgcgcattgaacaggcgcttgaagctgga
gaaaaaatattaatttacggtgactatgacgccgatggtattacgagtacgaccgtcatg
ctccatacattgctggacttaggagcagatgtcgattttgttataccaaatcgctttgcg
catggctatggcccaaatgagcaattattccgtgaagcgcatgaaaagggtgtgcaatta
attattaccgtcgataacggcattagcggtattgagccgatccgtgtagcgaaggagcta
ggtatggatgtcattgtgacagatcaccatgaggcaggagaagtgttaccacctgcggat
gtgattatccatccacgtgtaccagaggggcattatcctttcggtgagcttgcaggtgtc
ggtgttgccttgaaagtggcacatgccttatatggagaaatacctacgcatttatatgag
ctagcagcaatcggcacaattgccgacttagttcctttagtcgatgaaaatcgctatatc
gttaagcaaggaattaagcatttacgccagtcacaaagcccgtgggttgaagctttttgt
aaagtagcaagtgcgaagcaagcagaaattaacgaggaaacgattggcttttattttgga
ccacgcttgaatgccattgggcgcctcggagatgcaatgccaggtgtccactttatgaag
agtgaagatatggaaacagcgaaggagctagctgagctgctaaatagtaaaaatgcggag
cgtaaaaatattgttgcgactattacggaagaagcagttgctatgattgagtcagatgac
aagctaaaaaatgcgcatgtgttagttgtggcacaggaaggctggaatccaggtgttgta
ggaattgttgcttcaatgcttgttgaacaatactatcgaccaacaattgtgctatcactt
gatacagagaaggggacagcgaaaggctcagcccgcagtatcgagggcttccatttattc
aacgagctagcaaaaaatcgcgatatcttgccacatttcggggggcatccaatggcagca
ggtatgaccttagcagcagcgcatgtagagcagctacaaatgcgtttaaatgagcaggca
aaggcttgtttaacagaggaacagctcattccgaagctcacaattgatattcctctagag
ttaagtgagatcacagtagaggcaattgaagaaatcgggcagctcggtccattcggtaca
gattttccaaagcctgttttcgcgttagagcaagtaaaggtaagtgccatgcgtaaaatt
ggcgcaaatgaaaatcatttaaaattagagctggatgatggctattgtacgatggatgca
gttggctttaacaaaggctatttatttaatgaaatatcctatggtgtcgctttatctttt
gttggtgatttacaaattaatgaatggcaaaaccgcaaaaagccacaatttatggtacag
gatgtgcaatcaaacgaatggcaattattcgatttacgtgggaaaaagcagctcgtgaat
attccacaggaagaaacgctatttgttgtttttgataagcagcttgtaccttatttcgaa
cagcatgtgccagtaacgcttgcggagcaaatagtgggacaaaaaccatatgtagcggtg
cttgatttaccgcctaatgaggagcgcttagcagagctactgcaacgcttacagccacag
cgcatttatgcccatttttatacagcctcatcgcagtattttagtggcatgccaacgcgc
cagcactttagctggtactatggctttttaaagaagcgcccgaactttgctttacagcag
catatcgagccacttgcgaagcatattgggctaaatattgacgtaattaattttatgaca
aaggtgttttttgagttaggatttgttacaatagagaatggtctgacgacagtcgttgaa
agtgcacccaaacaggcattggagacagctccgtcatacaaagaacgttcagcacaaata
caattagagcaaaagctgttatatgcaacatatagtgagctaaagcaatggttagatgga
caaatgtctagggaggactag
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