Lysinibacillus louembei: R6U77_16775
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Entry
R6U77_16775 CDS
T09574
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
llb
Lysinibacillus louembei
Brite
KEGG Orthology (KO) [BR:
llb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llb03019
]
R6U77_16775
03009 Ribosome biogenesis [BR:
llb03009
]
R6U77_16775
Enzymes [BR:
llb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R6U77_16775
Messenger RNA biogenesis [BR:
llb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R6U77_16775
Ribosome biogenesis [BR:
llb03009
]
Prokaryotic type
rRNA helicases
R6U77_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WPK11525
LinkDB
All DBs
Position
complement(3356227..3357528)
Genome browser
AA seq
433 aa
AA seq
DB search
MSKYTDYQLKPFLQDAVAKLGFVEPTPIQKEMIPLVLKGKSAIGQAHTGTGKTHSFLIPI
VQRLNEEKQEVQAVITSPTRELAQQIFDALQQLVEGTSIQAKLFIGGTDKQRSIDKLKTQ
PHIVVGTPGRIKDLVKENALLVHTANLLVVDEADLAFDMGFIEDIDGFASHMPENLEMFV
FSATIPEKLQPFLKKYMDSPVHIHMNDKRPVAENIDFYLVPVRSKSRDTRLVEVIKSINP
FLAVIFCNTRKTAEHVAGYLAEQGIRSGQIHGDLSPRDRKKMMKQIRDLEFQFIVATDLA
ARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFKPEDEDALVRVEKMGI
PFEQKDIKNGEWIDLKDRHQRKNRVKQENEIDVKAKALVRKPKKVKPGYKRNMKWEMEKI
KKRERRLKNRGKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatacagattatcaattaaaaccttttttgcaggacgccgttgctaaatta
ggctttgttgaaccaacaccgattcaaaaggaaatgataccacttgtactaaaaggaaaa
agtgcaattggacaagcacatacaggtacgggaaaaacgcatagctttttaattccaatc
gtccaacgtttaaatgaggaaaagcaagaagtacaggcggtgattacatcaccaacacgt
gagcttgcacagcaaattttcgatgccctacagcagcttgtagaaggtacaagtattcaa
gcaaaattatttattggtgggacggataagcagcgttctatcgacaaattaaaaacacag
ccacatatcgttgttggcacaccaggacgcatcaaagatttagtgaaggaaaatgctttg
ttagtgcatacagcgaacctgcttgtcgttgatgaggcagatttagcatttgatatgggc
tttattgaagatatcgatggctttgcgagccacatgcctgaaaatctcgaaatgtttgtc
ttttcggcaacaattcctgaaaagctacagccatttttaaagaaatatatggattcacct
gttcatattcatatgaacgataagcgaccggtagcggaaaatattgatttttatcttgtt
cctgtgcgttcaaaatcgcgtgatacacgcttagttgaagttattaaaagcatcaacccg
tttttagcggttattttctgtaatacgcgtaaaacagcggagcatgtagcaggctattta
gcggagcaaggaattcgttcaggacaaattcatggtgatttaagcccacgtgaccgtaaa
aaaatgatgaagcaaattcgtgatttagagttccaatttatcgtagcgactgatttagca
gcgcgcggtatcgatattcaaggtatttcacatgttattaactatgagattcctgaggat
ttagagttctttattcaccgtgttggtcgtacagcgcgtgctggcaataaagggacagcg
attaccttgttcaagccagaggatgaggatgcattagtacgtgtagagaaaatgggcatc
ccgtttgagcaaaaagatattaaaaatggtgaatggattgatttaaaggatcgccatcaa
cgtaaaaaccgcgttaaacaggaaaatgaaattgatgtgaaagcgaaagcgcttgtgcgt
aagccgaaaaaagtaaaaccaggctataagcgcaacatgaaatgggaaatggaaaaaatt
aaaaaacgtgagcgccgcttgaaaaacagaggtaagaaatag
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