Lysinibacillus louembei: R6U77_17220
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Entry
R6U77_17220 CDS
T09574
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
llb
Lysinibacillus louembei
Pathway
llb03030
DNA replication
llb03430
Mismatch repair
llb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R6U77_17220 (holA)
03430 Mismatch repair
R6U77_17220 (holA)
03440 Homologous recombination
R6U77_17220 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llb03032
]
R6U77_17220 (holA)
03400 DNA repair and recombination proteins [BR:
llb03400
]
R6U77_17220 (holA)
Enzymes [BR:
llb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R6U77_17220 (holA)
DNA replication proteins [BR:
llb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R6U77_17220 (holA)
DNA repair and recombination proteins [BR:
llb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R6U77_17220 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WPK11610
UniProt:
A0ABZ0RU07
LinkDB
All DBs
Position
complement(3448494..3449507)
Genome browser
AA seq
337 aa
AA seq
DB search
MITKIWQDIKKGSIAPVYLIVGEETYFIDETISRLKDALSGQEEVEVMPFDLTERSVDVV
IDEADTIPFFTDRKLIIAKNASFLKAAEKGKEKIDHDLKRLETWLSYPTDTAVTVFIAPY
EKLDERKKIVKLLKDKAVLILAESPKEQDLYVWMKLEVESMGKVMTNEASVKLVEMVGTN
MLQLKAELEKMVLYLGEEHEVTVDIVEELVAKTLEHDAFQMLNAYLGNRQAEALTIYHDL
LRQKEEPIMLVGLLASNIRTMSQAFYLLTKGYHPQQIAKQLKVHPYRIKMILEQRNRPSA
ERLLQALNALATVDLQLKTTSSNRARVLELFLMKPLL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaaaatttggcaggatataaagaaggggagtatagcccctgtttatttaatt
gttggagaagaaacgtattttatagatgaaacaataagccgtttgaaggatgcattgagt
ggacaagaggaagttgaagtaatgccttttgatttaactgaacgatctgtagatgttgta
atagatgaagcagataccataccattttttacagacagaaagcttatcattgcgaaaaat
gcttcatttttaaaggcagcagaaaaaggtaaggaaaaaattgaccatgatttaaagcgt
ttagaaacgtggctatcttatccaactgatacagctgttacggtttttatagcgccatat
gaaaaattagatgagcgcaaaaaaattgtcaagctgttgaaggacaaggctgttttaatt
ttagcagaatcgccaaaagagcaggatttatatgtatggatgaagcttgaagtagagtcg
atgggaaaggtcatgacaaatgaggcgtccgtgaagcttgtcgaaatggttgggactaac
atgctacagctaaaagcagagctagaaaaaatggttttgtatttaggtgaggagcatgaa
gtaacagtagacattgttgaggagcttgttgctaaaacgctggagcatgatgcctttcaa
atgctaaatgcttatttaggcaatcgacaggcagaggcattaacaatttatcatgattta
ttgcgccaaaaagaagagccaattatgcttgttggtttactggcatccaatattcgcacg
atgagccaagctttttatctactaacaaaaggctatcacccacagcaaattgcgaagcaa
ctaaaagttcatccatatcgcattaaaatgatacttgaacaacgtaatcgtccatcagca
gaacgtttattgcaagcattgaacgcacttgcaacggttgacctacaactgaaaacaacg
agcagcaaccgtgctcgtgtgctagagctatttttaatgaagcctcttctgtaa
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