Lactococcus lactis subsp. cremoris SK11: LACR_0003
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Entry
LACR_0003 CDS
T00420
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
llc
Lactococcus lactis subsp. cremoris SK11
Brite
KEGG Orthology (KO) [BR:
llc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llc03400
]
LACR_0003
Enzymes [BR:
llc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACR_0003
DNA repair and recombination proteins [BR:
llc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LACR_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Dna2
Motif
Other DBs
NCBI-ProteinID:
ABJ71640
UniProt:
Q033I2
LinkDB
All DBs
Position
2913..6212
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AA seq
1099 aa
AA seq
DB search
MEILYTEITQDLTEGLLEIALEELEKNRKVYYIVPSSMSFEKEKEILERLAKGSDTAVFY
LLVTRFKQLPYYFDKREKATMKTELGTVGLSMLFRRILRSFKKDEIPLYFSLQDSAGFLE
MLIQLRAELLTANLSVENLPDNPKNQELKKILTTFEAELSVEYANYSEFGDFTNRLADGE
FDQQLKDVTIIIDGYTRFSAEEELFIESIQEKVARFVVGTYSDENSLTAGSETIYVGTSQ
MITRFRNKYPVELRKIASSSVNEVYSKLTRMLDLDSRFVITDEKIELKAEDEKYFRIWEA
ENQKVEIERVAKEIRQKISQGAFFKDFTVLVGDPAAYEITLKEIFDLYEIPFFYAQEESM
SQHPLVIFFESLFAIKKNNYRTDDVVNLLKSKVYTDVNLDEEVIDYFEYYVQKYKISGRK
KFTEEFIESEFSQIELVNEMREKLLGSESPLQVFLGNNRQKTGKKWVSDLQALLENGNVM
ANMNAYFSAAELQNEHQMADKHEQVWQMLISTLNEFFAVFSDEKLKSVEFLDILLAGLKN
AKYRQIPANVDVVNVKDYELVEPKTNNYIYAIGLSQTNFPRIKKNSTLLSDEERLEINQT
TDENQFIEQLNVANYQKNQFTVLSLINSAKESLVLSMPQIMTNEQGEFSPVFQLFLKDAD
EKILQKIQGVNLFESLEHIGNSRSVIAMIGQIERELVESEETNEDKRVFWSSIFRILVKS
NADFQKILLDLAKDIDTVNLAPDTLEQIYGDKIYASVSSFERFYNCEYQYFLENTLSLET
FENIDINSKIVGNFFHEVFEKVMKETDLSAENFDEKLTLFLQEVDKNYSRYFTQDATARF
TWSNLEEIVRQTATVLKATVSTDELKTLLTESSFGLSKSELGNFSVDDIYLRGRIDRLDQ
LSTDYLGVIDYKSSAHSFKLQEAYDGLSLQFMTYLDVIKQAFPNQKIWGALYLQFKNQPI
NLSEINQLSEIANILKESMRYDGLVLEDAAEQIKGIENIALKNTNSYNEEEFEQLLKLNE
EHYRAAGQRLKNGKIAINPIMKRSEGIDQSGNVRGCRYCPLKSICRFEANIHMNEHSREI
GQKSQAEILAELKGEGRDE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttatatactgaaattacacaagatttgacggagggattattagaaattgct
cttgaagaacttgaaaaaaatcggaaagtttactacattgtgccttcttcaatgtcattt
gagaaggagaaagaaatattagaacgattagcaaaaggtagtgatacagcagttttttat
ttacttgttacgcggtttaaacaactgccttattactttgacaagcgtgaaaaagcaaca
atgaaaacagagttaggcacggtggggctttcgatgctttttcggcgtattttgagaagt
tttaaaaaagatgaaattccgctttatttttcattgcaggattcagccggatttttagag
atgctgattcaattgagagcagaattgctgacagccaatctgtcagtagaaaatttgcca
gataatcctaagaatcaagaattgaaaaaaattctaacaacatttgaagctgaattatct
gtggaatatgcgaattactcagaatttggagattttacaaatcgacttgctgatggagaa
tttgatcagcagcttaaagatgtaacaattatcattgatggttatactcgattttctgcg
gaagaagagttatttattgaaagtattcaagagaaagttgcccgctttgttgttggaact
tatagtgatgaaaattcactgacagctggttcggagacaatttacgtgggaacgagtcag
atgattactcgctttcgaaataaatatccagtagaattaagaaaaatagcttcttcatct
gtcaacgaagtttacagtaagttgacaagaatgcttgatttagattctcgttttgttatt
actgatgaaaaaattgaattaaaagcagaagatgaaaagtattttagaatctgggaagct
gaaaatcaaaaagttgaaatcgaacgagtggctaaggaaattagacaaaaaatcagccaa
ggggcttttttcaaagattttactgttttagttggtgatccagcagcttatgagattact
ttgaaagaaatttttgatctctatgagattccatttttctatgctcaagaagaatccatg
agccagcatcctttagtgatcttttttgaaagtctatttgccatcaaaaaaaataattat
cgaacggatgatgttgtcaatcttttaaaaagtaaagtttacacagatgtcaaccttgat
gaagaagttattgattactttgaatactatgttcaaaagtataaaatttcaggtcgcaag
aaatttacagaagaatttattgaaagtgaattttctcaaattgaattagttaatgaaatg
cgggaaaaactacttggaagtgaatctcctttacaagtatttttagggaataatcgacaa
aaaacaggaaaaaaatgggtttctgatttacaagctttacttgaaaatggaaatgtaatg
gcaaatatgaatgcctatttttccgctgccgaattacaaaatgaacatcaaatggctgat
aaacatgaacaagtctggcaaatgttaatttcaacgctgaatgagttcttcgctgttttt
tctgatgagaaattgaaaagtgtagagtttttagatatcttattggctggtttgaaaaat
gcaaaatatcgtcaaattccagcaaatgttgatgttgttaatgttaaagactatgaactt
gttgaacccaaaacaaataactatatttatgctattggtttaagtcaaacgaatttccct
cgaataaagaaaaattcgacgctcttatcagatgaagagcgattagaaattaatcagaca
actgatgaaaatcaatttattgagcaacttaatgttgccaactatcaaaaaaatcagttt
acagtcttgtctttgattaactcggcaaaagagagtttagttttgtcaatgccacagatt
atgaccaatgaacagggagaattttctccagtttttcaattatttttaaaagatgctgat
gaaaaaatccttcaaaaaattcaaggagtgaatctttttgaaagtctagaacacattgga
aatagccgttcggtcattgccatgattggacaaattgaacgtgaattagttgaatctgag
gaaaccaatgaggataagcgagttttttggtctagtatttttcgaatattagtgaaatca
aatgctgattttcaaaaaatattactcgatttagctaaagatattgacactgtaaatttg
gcaccagacacactagaacaaatttatggtgataaaatttatgcttctgtcagttctttt
gaacgtttttacaattgtgaatatcagtactttttagagaatacactaagtctggaaact
tttgaaaatattgatattaattctaaaattgttgggaattttttccatgaagtttttgaa
aaagtcatgaaagagactgacttatcagcagaaaattttgatgaaaagttgacacttttt
ttacaagaagttgacaaaaactattcacgctattttacacaagatgcaacggcaagattt
acttggagtaatttagaagagattgtcaggcaaacggcgactgttttgaaagcaactgta
tctactgatgaactaaaaactttactgacagaaagtagttttggtttatctaaaagtgag
ttaggaaatttttcagttgatgatatttatttacgaggaagaattgaccgtcttgaccaa
ctttctacagattacttaggagtgattgactataaatcaagtgctcattcatttaaattg
caagaggcttatgatggactaagtttacaatttatgacctatttagatgtgataaaacaa
gcttttcctaatcaaaaaatctggggtgcactttatttacaatttaaaaaccaaccgatt
aacctatcagaaattaatcagttgtcggaaattgctaacattttgaaagaatcaatgcgt
tatgatggattagtattagaagatgcagctgagcaaataaaaggtattgaaaatattgct
ttaaaaaatactaatagttataatgaagaagaatttgagcaacttttaaaattaaatgag
gaacattaccgggcagctggtcagcgattgaaaaatggaaaaattgcaatcaatccaata
atgaaacgctccgaagggattgatcagtcaggtaatgtccgcggctgtcgatattgtcct
cttaaatcgatttgtcgatttgaagcaaatattcatatgaatgagcacagccgtgaaatc
ggacaaaaatcccaagcagaaatcctagcagaattaaaaggagaagggcgagatgagtga
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