Lactococcus lactis subsp. cremoris SK11: LACR_0462
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Entry
LACR_0462 CDS
T00420
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
llc
Lactococcus lactis subsp. cremoris SK11
Brite
KEGG Orthology (KO) [BR:
llc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llc03019
]
LACR_0462
03009 Ribosome biogenesis [BR:
llc03009
]
LACR_0462
Enzymes [BR:
llc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LACR_0462
Messenger RNA biogenesis [BR:
llc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LACR_0462
Ribosome biogenesis [BR:
llc03009
]
Prokaryotic type
rRNA helicases
LACR_0462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABJ72065
UniProt:
Q031Q7
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All DBs
Position
433672..435012
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AA seq
446 aa
AA seq
DB search
MKFTDFNFKDYINQTLENIKFEKPTEVQQKLIPIVLSGRDLVGESKTGSGKTHTFLLPIF
QNINPELDEVQAVITAPSRELATQIYKAAQEFVKVNGKIRVSNFVGGTDKARQIKKLEAA
QPHIVIGTPGRIHDLVKSNALVVHTARTFVVDEADMTLDMGFLADVDQIASSFGKRVQML
VFSATIPQKLQPFLKKYLHNPVMEKIANKTVISDTIENWLVSTKGSSHNQLLLQLTKALN
PYMAMIFANTKGRVDDIHHFLTSNGLKVAKIHGDVPPRERKRIMNSIKNLDYQYVVATDI
AARGIDIEGVSHIINDEIPKDLTFFVHRVGRSGRNGLRGTAITLYSPSDDSSIREIEKMG
VTFQPKAVKDGEIVDSYDRDRREKRTKKQDEISLATRGALAKGKKKVKPGYKRAIKWQIE
EENKKNRRAERNKNARKTRDSRKQSF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagactttaattttaaagattatatcaaccaaactttagagaatatcaaa
tttgaaaaacctactgaagtacaacaaaaattgattcctattgtcctttctggacgtgat
ttggtaggggaatctaaaacaggttctggtaaaacgcatacctttttattgccaattttc
cagaatattaatcctgaacttgatgaagtgcaagcagtcatcacggcaccttctcgcgaa
ttagcgacacaaatctacaaagctgctcaagaatttgtgaaagtaaatggcaaaattcgc
gtttcaaactttgtcggtggaacagataaagcccgccaaattaaaaaattagaagcagca
cagccacatatcgttattgggacaccaggtcggatccatgatttagttaagtctaatgcc
ttggttgttcatacagcaaggacatttgttgtcgatgaggcggatatgacacttgacatg
ggctttttggcagatgttgaccaaattgcttcaagctttggtaaacgtgtgcaaatgcta
gtcttttcagcaacaattcctcaaaaactgcaacctttcttgaaaaaatatttgcataat
ccagtcatggaaaaaattgcaaataaaacagtcatttcagataccattgaaaactggtta
gtttcaacaaaaggaagttcacataatcaacttttacttcaattgactaaagcactcaat
ccttatatggcaatgatttttgctaatacaaaaggacgtgttgatgatattcatcatttc
ttgacaagtaatggtcttaaagtggcaaaaattcatggtgacgtgccaccacgtgagcgt
aaacgtatcatgaattcaattaaaaatcttgattatcaatatgttgttgcgactgatatt
gcagcgcgtggaattgatatcgaaggagtttcacatattatcaatgatgaaattccaaaa
gacttgactttctttgttcaccgtgttggacgttctggacgtaatggattacgtggtaca
gcgattacactttacagcccttctgatgattcaagcattcgtgaaatcgaaaaaatgggt
gtaacttttcaacctaaggctgtcaaagatggcgaaattgtagattcttatgatcgtgac
cgtcgtgaaaaacggacgaaaaaacaagatgaaatttcacttgctactcgtggagccttg
gctaaaggaaagaaaaaagtcaaaccaggctataaacgtgctattaaatggcaaattgaa
gaagaaaacaaaaagaatcgtcgtgcagagcgcaataaaaatgcccgtaaaacacgtgat
tctcgtaagcaaagtttctaa
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