Lactococcus lactis subsp. cremoris SK11: LACR_1903
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Entry
LACR_1903 CDS
T00420
Name
(GenBank) ATP-dependent DNA helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
llc
Lactococcus lactis subsp. cremoris SK11
Pathway
llc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LACR_1903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llc03400
]
LACR_1903
Enzymes [BR:
llc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LACR_1903
DNA repair and recombination proteins [BR:
llc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LACR_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
UvrD_C
HHH_8
HHH
5_3_exonuc
UvrD-helicase
Herpes_Helicase
IMS_HHH
AAA_12
nSTAND3
AAA_28
AAA_16
Zeta_toxin
T2SSE
AAA_5
NTPase_1
MeaB
Motif
Other DBs
NCBI-ProteinID:
ABJ73387
UniProt:
Q02XD5
LinkDB
All DBs
Position
complement(1798855..1801356)
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AA seq
833 aa
AA seq
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MTDKTYVTGSIEAIFFYNPSNFYKVLLIEIDETNAEYDDFEIVVNGTIGDVVEGDSYTFY
GQLTQHPKYGEQLQVSQYEKAVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDS
ILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEYGLPSKLTFQIYELYKEETIE
KIEENPYQLVEEVKGVGFKTADKIASELGIEADSPNRFRAALMHEVNTHSQATGDTYIEA
KNLLELTIDLLEEARNIEVNPAEVAAEINGLIVDGKVQQEGTKIFENSLFFAEDGIRKSL
TALTNRLGKDFADEKLLTVLEEVEKDLEITYDELQKQAIIGAMNQQFFILTGGPGTGKTT
IINGFIETYARLYQLDLDPDHYNDDVFPILLAAPTGRASRRMNELTGLPAATIHRHLGLG
QDEAEDALGNELSGSLLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPSVKLDKIFRQGDDSTITDLAHHIKDGQLPADFTVKKTDRSYFEVSANFV
PQTVEQIASAWQKRGNNPFELQILAPMYKGAAGINAMNILLQNLFNPLNDRLEFVLGDMK
FREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQDEIVMDFDGQELTYPRSEWYK
ITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTFLVERFKDDKPAAENLSVDSLTKKVTDKKEISNKEKNSGSVADLNLENFS
VRKKTAPKVEEISLFDEETESLGNGILTEALILSGNFDPLIGLTEQDFAIFNK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaaacttatgttacaggctcaattgaagctatttttttctataatccaagc
aatttttataaagttttattaattgagattgatgaaacaaatgctgaatatgatgatttt
gaaattgtggtcaatgggacaattggcgatgtggtcgaaggggattcttatactttttat
gggcaattaacccagcatccaaagtatggggaacaattgcaagtcagtcaatatgaaaag
gctgtaccaacgtctggtgctggtttggtcaagtatttttcatcagataaatttccaggg
attggtaaaaaaacggcagagaaaattgttgaaacttttcctgaaaatacggtagattct
attttagaagcgcctgagaaattggatggtttattaactctagccagaaaaaattcattt
atcaaacgtttgcgtgaaaatcatggtatggaaaaagtgctgaccaagcttgcggagtat
ggcttgccaagtaaactcacttttcaaatttatgagttgtacaaagaggaaacgattgaa
aaaattgaggaaaatccttatcaacttgtggaagaagttaaaggggtgggctttaaaact
gccgataaaattgcgagtgaactagggattgaagcggatagtccaaatcgttttcgagcg
gctttgatgcatgaggtcaatacgcattcgcaagcaacgggtgacacttatattgaagct
aaaaacttgctggaattgacgattgatttacttgaagaagccagaaatattgaggtcaat
ccagctgaagttgctgcggaaataaatggtttaattgttgatggaaaagtacagcaagaa
ggaacgaaaatatttgaaaattccttgttttttgctgaagacggtatccgaaaatcactg
acagccttaactaatcgtttgggaaaagattttgctgacgaaaagttactgacagttttg
gaagaggtagaaaaagatttagagattacttatgatgaacttcagaaacaggccatcatt
ggagcgatgaatcagcaatttttcattttgactgggggaccaggaacggggaaaacaacg
attattaatggtttcattgaaacttatgcccgtctttatcagttagatttagaccctgac
cattataatgatgacgtttttcctattttattggcggcaccgactggtcgcgcttcaaga
cggatgaatgagttgactggacttccagcagcaacaattcatcggcacttaggcttaggg
caagatgaggcagaagatgcgcttggtaatgagttgtcaggttcacttttgattgtcgat
gaattttcaatggttgatacttggctagccaacaaactttttcaagccattcctggttca
atgaaagtccttctcgttggcgatgctgaccaacttccttctgtgggccctggacaaatt
tttgcagatttattaaaaattccagaaattccgtcagtaaaattggataagatttttcgt
cagggagatgattcaacgattaccgatttggctcatcatatcaaagatggacaattacct
gcagattttacggtgaaaaaaactgaccgttcttattttgaagtgagtgctaattttgta
ccacaaacggtggagcaaattgctagtgcttggcaaaaaagaggaaataatccttttgaa
ttacaaattttagcgcccatgtataaaggggccgctgggattaatgcaatgaatattctc
ttgcaaaatctctttaatccgcttaatgaccggcttgaatttgttttgggtgatatgaaa
tttcgtgaaggagataaagtattacatttagtcaatgacgctgaggccaatgtattcaat
ggagatttaggacaaattgttgaattgattgcagcaaaatatactgacagtaaacaagat
gagattgtgatggattttgatggtcaagaattgacctatcccagatctgaatggtataaa
attacgcttgcttatgccatgtctatccataaatcccaaggttcggaattttcaacggtc
atcgtcccgatggtctcttcttattcacggatgttagagcgaaatttactctatacagca
atcacgagggcaaagcaaagcttaattttattgggtgaagagcgtgcctttgctcaggct
gtggcgcgtgaaggagccaatcgaaaaacttttcttgttgagcgttttaaggatgataag
cctgcagctgaaaatctgtcagtagattccttaactaaaaaagttactgacaagaaggaa
atatctaacaaagagaaaaattctggatcagtagcagacttaaacttagaaaatttttct
gtcagaaaaaaaacagcaccaaaagttgaggaaatttcattatttgatgaagaaactgaa
agtttggggaatggaattctaacagaagcgctaattttatctggcaattttgatccctta
attggattgactgagcaagattttgcgatttttaataaatag
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