Lactococcus lactis subsp. cremoris SK11: LACR_2047
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Entry
LACR_2047 CDS
T00420
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
llc
Lactococcus lactis subsp. cremoris SK11
Pathway
llc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LACR_2047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llc03019
]
LACR_2047
03016 Transfer RNA biogenesis [BR:
llc03016
]
LACR_2047
Enzymes [BR:
llc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LACR_2047
Messenger RNA biogenesis [BR:
llc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LACR_2047
Transfer RNA biogenesis [BR:
llc03016
]
Prokaryotic type
tRNA degradation factors
LACR_2047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
PCB_OB
OB_RRP5_4th
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
ABJ73527
UniProt:
Q02WZ5
LinkDB
All DBs
Position
complement(1938238..1940547)
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AA seq
769 aa
AA seq
DB search
MAKETFSIEFAGRTLTVETGQVAKQANGAVVVRYGDTTVLTAATMGKMATGDFFPLQVNY
EEKMYAAGKFPGGFNKREARPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDEN
ASGRVAAMFGSSLALAISDIPFDGPIAGVEVAYIDGKYVINPTVAEKESSSLELSVAGNI
NAINMVESGAKELSEEVMLGALLAGHNAVKELIEFQNEIVAKVGKEKAEVELLHVDEDLK
AEVIAAYNSDLQKAVQVEEKLAREAATKAVKEAIISVYSAKYENDENLSIILRDLAEILE
GMEHAEVRRLITEDKIRPDGRKIDEIRPLDAEIDFTPRSITHGTGLFTRGQTQALSTLTL
APMNEAQIIDGLNDEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVLP
SLEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYT
VLTDIQGLEDHFGDMDFKVAGTREGITALQMDIKISGITPEILAEALAQAKTARFQILDV
IEATIAQPREELAPSAPKIDTIMIPVDKIKVVIGKGGEQIDKIIAETGVKIDIDDEGLCS
IFSSDQSAIDRAKEIIAELVREAKVGEVYEAKVVRIESFGAFVNLFGKQDAMVHISEMAW
ARTAKVEDVMKLGDVVKVKIMKIDDKGRVDASMRALVEKPEGYVEPERKPRERRDNKDRR
NGNGFDRRNNDRNNHNNHNNNSGNHSFELRERKSHVDHEFPELSTKKPE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagaaacattttcaatcgaatttgcaggacgaactttaactgttgaaacaggt
caagttgcaaaacaagcaaatggagctgtggttgtacgttatggagatacaacagttttg
acagctgctacaatgggtaaaatggctacaggtgatttcttcccactacaagtgaattat
gaagaaaaaatgtatgctgcaggaaaatttccaggaggttttaacaaacgtgaagcgcgt
ccttcaacagatgcgactttgacagctcgtttgattgaccgtccaattcgtccaatgttt
gccgaaggttttcgtaatgaagttcaagtaatcaatactgtcctttcttatgatgaaaat
gcgtctggtcgtgtggcagcaatgtttggttcatctcttgctctggcgatttctgatatt
ccatttgatggtccaattgctggtgttgaagttgcttatattgacggaaaatatgtcatc
aatccaactgttgcagaaaaagagtcttcaagtttggaactttctgttgctggaaacatt
aatgccattaacatggttgagtctggggcaaaggaattgtcagaagaagtgatgcttggt
gcacttttagctggacataatgctgttaaagaattaatcgaatttcaaaatgaaattgtt
gcgaaagttggaaaagaaaaagctgaagttgaacttttgcatgttgatgaagatttgaaa
gccgaagttattgcagcttacaattcagatttacaaaaagccgttcaagttgaagaaaaa
ctagcgcgtgaagcagcaacaaaagcagttaaagaggcaataatttctgtttacagtgca
aaatatgaaaatgatgaaaatctatcaatcattttgcgtgatcttgctgaaattcttgaa
ggaatggaacatgcagaagttcgtcgtctgattaccgaagataaaatccgtcctgatgga
cgtaaaattgatgaaattcgtccattggatgcggaaattgactttactccacgtagtatt
acacacggaactggtttatttactcgcggtcaaactcaagccctgtcaaccttgacttta
gcaccaatgaatgaagcgcaaattattgatggcttaaatgatgaatataaaaaacgtttt
atgcaccactacaatttcccacagtactctgttggtgaaactggacgttacggggcacca
ggtcgacgtgaaattggtcacggagcactcggagaacgggctttagaacaagtccttcct
tctttggaagaattcccttatgctattcgtttagttgctgaggtattggaatcaaatggt
tcttcatcacaagcttcaatttgtgcgggaacacttgcactgatggctgggggtgtgcca
attaaagcgccagttgctggaattgcgatgggcttgatttctgacggaacgaactatact
gttttgaccgacattcaaggacttgaagaccattttggtgatatggactttaaggttgcg
ggaactcgtgaaggaattactgctctccaaatggatattaagatttctggaattacacca
gaaattcttgccgaagctcttgctcaagccaaaactgctcgcttccaaatcttagacgtg
attgaagcaacaattgcgcaaccgcgtgaagagttggcgccgtctgctcctaaaattgat
acaattatgattcctgtagataagattaaagtggtcatcggtaaaggtggcgaacaaatc
gataaaattatcgcagaaactggggttaaaattgacattgatgatgaagggctttgttca
attttctcttctgaccaatcagcgattgatcgtgctaaagaaattattgctgaacttgtc
cgtgaagcaaaagttggcgaagtttatgaagcaaaagtggttcgtatcgaaagttttggt
gcctttgtcaatctctttggcaaacaagatgctatggttcacatttcagaaatggcttgg
gcacgtacggccaaagttgaagatgtcatgaaactaggcgatgtagttaaagtgaaaatc
atgaagattgacgataaaggacgtgttgatgcgtcaatgcgtgctttggttgaaaaacca
gaaggatatgttgaacctgagcgtaaaccccgtgaacgtcgtgataataaggaccgtcgt
aatggaaatggattcgatcgtcgcaacaacgaccgtaataaccataataaccataacaac
aatagcggaaatcatagttttgaacttcgtgaacgcaaatcacacgttgaccatgagttt
ccagagctttcaactaaaaagccagaataa
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