Lactococcus lactis subsp. cremoris SK11: LACR_2429
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Entry
LACR_2429 CDS
T00420
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
llc
Lactococcus lactis subsp. cremoris SK11
Pathway
llc03030
DNA replication
llc03430
Mismatch repair
llc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACR_2429
03430 Mismatch repair
LACR_2429
03440 Homologous recombination
LACR_2429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llc03032
]
LACR_2429
03400 DNA repair and recombination proteins [BR:
llc03400
]
LACR_2429
Enzymes [BR:
llc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACR_2429
DNA replication proteins [BR:
llc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACR_2429
DNA repair and recombination proteins [BR:
llc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACR_2429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
Rv2179c-like
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ABJ73872
UniProt:
Q02W00
LinkDB
All DBs
Position
complement(2252691..2257598)
Genome browser
AA seq
1635 aa
AA seq
DB search
MENLFEKLMDQIKMPPNLRRSRQFEHADIENVEVHTASKLWHFQLIFDEILPIDTYKLLT
ELTETAFSTIARTEISVSSREIVIDEQNLNDYYQYALTLPELCDSAFSSIFKKYHLELQE
EKIQLMVEDNPRMDFFVEKYFPILEEKFADFGFGKLKIIPVVDQQLTDLQVAAHAEKVAA
RLAAQTAEQAQVSELKKQRSEERESKNTREAKPEFVETALSDGIFFGRKISGQSPITSMS
FIAGEGFGVIFEGLVFEAAHREFTGKESGKVNHILELKMADETSTFMISKWGRKDEEIAQ
FDQIVSTVKAMNEKILTDGADNFTDSLSDALWLRVQGNIEHDKYKDDLVMTANAVVEIKP
KPTIDRVALQIKAVKSDKIQLGREIKNNEPVTPMRSVSEFSTNGPVVFEGYVFKGELREI
KSRKTGNISYLLEFEMTDYTSSFYVQKWLRGEEEIQLAKQIKAGLWCRVRGNVQRDNFKN
DLVLQLTDLIEIPTQNVREDKSDEKRVEFHAHTNMSQMDAIPSASSLVAQAAKWGHKAIA
ITDHGGLQSFPEAHSAGKKNGVKIIYGVEANLVEDKIPIVFNETDVDMYESTYVVFDVET
TGLSAVHNDLIQIAATKMHKGNPIDEFDEFINPGYRLSEFTTELTGITDDHVKNAKPLYE
VLTKFQKFCEGTILVAHNASFDVGFMNMNYSRNGLPIISQPVVDTLEFARNLYPEMKRFG
LGQLTKKFQIGLEHHHMANFDAEATGRLLFVFLEELRTRNTGWTSLLELNAKLVSEDSYK
KVRPKHVTLYAKTQEGLKNLFKIVSFENVKYYAGLPRLPRSVLEANREGLLVGSACEVGE
VFDAAINKTFEETLEIAKFYDFIEVFPPALYRSLVVGGSFKSEKELEQTLKDLIKIGKTL
VKPVLATGNLHYLNPEDAIYREIIVRSLGLGAEINWTQGHGEHAKPLPLPEAHFRTTDEM
LEAFSFLDEKTAREIVIDNTQKMADEFDVLTPVRDDLYTPKMVFDGGETSEERIVRLTYE
KAHEWYGNPLPDIIDARLEKELRSILGNGFSVVYIISQELVKRSNERGYIVGSRGSVGSS
LVATMIGITEVNPLAPHYRCPECQYFECYDDGSFGSGYDMPDKNCPKCDHKLIKDGHDIP
FETFLGFKGDKVPDIDLNFSGDDQPLAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKG
YERDYDQFYGNAEIDRLAAGSTGVKRTTGQHPGGIIVIPNYMDVYDFSPVQFPADDVNAE
WQTTHFDFHAIHDNILKLDILGHDDPTMIRKLQSLSGIVPQDIPMDDPGVMKLFTGTESL
GLTEEQLGVKLGTLGIPEMGTFTSMNMIAEAKPKNFADLLQISGLSHGTDVWSGNAQDLI
RSGIADLSSVIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMRE
HEVPEWYIESCSKIKYMFPKAHAAAYIMMALRVAYFKVHHPIFYYCAWFSIRATAFDIGV
MGAGLEAVKSKMKEIKDKGFEATNVETNLYTTLELCNEMLERGFTFGKIDLYRSEATEFV
IDGDTLIPPFVTMDGLGENVAKQIVAARAEGEFLSKMELRKRGGVSQTIIENMTNMGVLE
GMPDDNQLSLFDDFF
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctttttgagaaattgatggatcagatcaaaatgccaccaaacttgcgtcgt
tctagacagtttgagcatgctgatattgaaaatgttgaagtgcatacggcaagtaagctc
tggcactttcagttaatttttgacgagattttaccaattgacacatataaattactgaca
gaattgacagagacagctttttctacaatcgctcgtacagaaatttctgtcagtagccgt
gaaatagtcattgacgagcaaaaccttaatgattattatcaatatgcgctgacacttcct
gaactttgtgattctgctttttcaagtatttttaagaaatatcatcttgaattgcaggaa
gaaaaaattcagttgatggttgaagataatccacgaatggacttttttgttgaaaaatac
tttccaattttagaagaaaaattcgcagattttggtttcggaaaattaaaaattattcca
gtggttgatcaacaattaaccgacttacaggtggctgctcatgccgaaaaagtagccgct
cgcttggccgctcaaacggcagagcaagctcaagtttcggagcttaaaaaacaacgctca
gaggaacgtgaaagtaaaaatactagagaagccaaaccagaatttgtagagacggcactt
tctgatgggattttctttggtcgaaaaattagtggacaaagtccaattaccagtatgtct
ttcatcgctggggaaggctttggggttatctttgaaggtcttgtttttgaggccgcacat
cgcgaatttacaggaaaagaatcaggtaaagtcaatcatattttagaattgaaaatggct
gatgaaacatcaacctttatgatttccaaatggggtcgtaaggacgaagaaattgcacaa
tttgaccaaattgtcagcaccgttaaagccatgaatgaaaaaattcttactgacggagcg
gataattttactgacagcctatctgatgccctttggttacgtgtgcaaggaaatattgaa
cacgacaaatataaagatgacttagtaatgacggcaaatgcggttgttgaaattaaacct
aaaccaaccattgaccgtgtggctctccaaatcaaagctgtaaaatcagataaaattcaa
ctgggtcgtgaaatcaaaaataatgagccagtcactccgatgcgttctgtcagtgaattt
tctactaacggtcctgttgtttttgaaggttatgtcttcaaaggggaactccgcgaaatc
aaatcacgtaaaacaggaaacatcagttatcttcttgaatttgaaatgactgattacacg
tcaagtttttatgtgcaaaagtggttacgtggcgaagaagaaattcaattggccaaacaa
attaaagcgggactatggtgtcgagttcgcgggaatgttcaacgggacaatttcaaaaat
gatttagtgctacaattgactgatttgattgaaattccgacacaaaatgttcgtgaagat
aagtctgatgaaaaacgtgttgagtttcatgcccatactaatatgagtcaaatggacgcg
attccgtccgcttcaagtttagttgctcaggctgcaaaatggggacataaagccattgca
attactgaccatgggggcttgcaatctttccctgaggctcactcggcaggtaaaaagaat
ggggtcaagattatttatggagtcgaggccaatcttgtcgaagacaaaatcccaattgta
tttaatgaaacagatgttgatatgtatgaatcaacatatgtcgtctttgacgtcgaaaca
acaggtctttcagcagttcataatgatttgattcaaattgcagcaacaaaaatgcacaaa
ggaaatcccattgatgaatttgatgaatttattaatccgggttatcgtttaagcgaattt
acaacagaactaaccggaattactgatgaccatgtcaaaaatgcgaaaccgctttatgaa
gtactgacgaaatttcaaaaattttgcgaaggaacaattcttgtcgctcataatgcatcc
tttgacgtgggcttcatgaatatgaactattcacgaaatgggctgccgattattagtcaa
cctgtcgttgatactcttgaatttgcccgtaatctctatcccgaaatgaaacgttttggt
ttaggacaattgaccaagaagtttcaaatcggacttgaacatcaccatatggccaatttt
gatgcggaagcaactgggcgtttgctctttgtattcttggaagaattacggaccagaaac
acagggtggacaagtctgttagaacttaatgccaagttggtcagtgaagattcttataaa
aaagtacgaccaaaacacgtgactttatatgctaaaacacaagaaggacttaaaaatctc
ttcaagattgttagttttgaaaatgtgaaatattatgctggtcttcctcgtcttcctcgg
tcagttttggaagccaatcgcgagggattacttgttggttcagcctgtgaagtcggcgaa
gtcttcgatgcagcgattaataaaacttttgaagaaacgcttgaaattgctaaattttat
gatttcattgaagttttcccaccagcactttatcgctcacttgttgtcggcggctctttc
aaatcagaaaaagaattggaacaaacgcttaaagatttgataaaaatcggaaaaacgctt
gtcaagccagttctggccacaggaaatctccattatctgaatccggaagatgccatttat
cgtgaaattattgtccgctcacttggtcttggggcagaaattaactggacacaaggacac
ggggagcatgcaaaacctcttccattacctgaagctcactttagaacaactgatgaaatg
cttgaagcctttagttttcttgatgaaaaaacagcgcgtgaaattgtcattgacaatacc
caaaaaatggctgatgagttcgatgttctcactcctgttcgtgatgatttatatacacct
aaaatggtctttgacggaggagaaacctcagaagagcggattgttcgcttgacttatgaa
aaagcccacgagtggtatggaaatccattgccagatattattgatgcaaggcttgaaaaa
gaactgcgatcgattttggggaatggtttctcagtcgtgtatattatttcgcaagaactt
gtaaaacgttccaatgagcgcggatatattgttggttctcggggatcagtaggttcgtca
ctggttgcgaccatgattggaataaccgaagtaaatccactggcacctcattaccgttgc
ccagaatgtcaatattttgaatgctatgatgatggatctttcggttcaggttatgatatg
ccggataaaaattgtcctaaatgtgaccacaaactcatcaaagatgggcatgatattcct
tttgaaactttcttaggtttcaagggagacaaagttcccgatattgatttgaacttttca
ggggatgaccaacctttggctcacttggacgttcgtgatattttcggggaagattacgct
tttcgggcaggaacaattggtacggttgccgaaaaaacggcttttggtttcgtcaaaggc
tacgaacgtgactatgaccaattttatggcaatgctgaaattgaccgtttagctgccgga
tcgacgggtgtcaagcgaacaacaggtcaacacccaggagggattattgttattccaaat
tacatggatgtttatgatttttctccagttcaatttccagccgacgatgtcaatgccgaa
tggcaaacgactcactttgatttccatgccattcatgataatatcttgaaactcgatatt
cttggacatgatgatccaacgatgattcgaaaattgcaaagtctttctggtattgttcct
caagacattccgatggatgaccccggagtgatgaaacttttcaccgggacagaatcttta
ggtttgaccgaagagcaattgggagtaaaactcgggactcttggaattcctgaaatggga
acttttacctcaatgaatatgattgccgaagccaaacccaaaaactttgctgatttactg
caaatttctggactttcccatggaacagacgtatggtcaggaaatgcccaagatttaatt
cgttcaggaattgccgacctttcaagtgttatcggttgtcgggatgatattatggtctat
ctcatccataaaggacttgaaaatggtcttgcttttacaattatggagcgtgtacgtaag
ggaatgtggaataaaattcctgccgaagaacgtgagaaatatgtggaagccatgcgagaa
catgaggttccagaatggtatattgagtcttgttctaagattaaatatatgttccctaaa
gcccatgcggcagcttatattatgatggctctgcgggtggcttatttcaaagtacatcat
ccaattttctattactgcgcatggttctctatcagggcaacggcctttgatattggtgtc
atgggggctggtcttgaagcagtcaaatcaaaaatgaaagaaattaaggataaaggtttt
gaggctacaaatgtggaaactaacctttatacaactttggaactctgtaatgaaatgtta
gagcgtggcttcacttttggtaaaattgacctttaccgctctgaggctacggagtttgtc
attgacggtgacactttgattccgccatttgtaacgatggacggattgggtgaaaacgtg
gcaaaacaaatcgtcgcagcgcgtgctgagggtgaatttttgagtaagatggaacttcgt
aaacgtgggggagtttcacaaaccattattgaaaacatgaccaatatgggcgttcttgaa
ggtatgcctgatgataatcaattaagcttatttgatgatttcttttga
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