Fructilactobacillus lindneri: AYR59_03145
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Entry
AYR59_03145 CDS
T04666
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lle
Fructilactobacillus lindneri
Pathway
lle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AYR59_03145
09124 Replication and repair
03420 Nucleotide excision repair
AYR59_03145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lle03021
]
AYR59_03145
03036 Chromosome and associated proteins [BR:
lle03036
]
AYR59_03145
03400 DNA repair and recombination proteins [BR:
lle03400
]
AYR59_03145
Enzymes [BR:
lle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AYR59_03145
Transcription machinery [BR:
lle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AYR59_03145
Chromosome and associated proteins [BR:
lle03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AYR59_03145
DNA repair and recombination proteins [BR:
lle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AYR59_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ANZ59099
UniProt:
A0AB33BCE9
LinkDB
All DBs
Position
complement(664807..667164)
Genome browser
AA seq
785 aa
AA seq
DB search
MVNKIGVRDLVGFILRSGDLATSLSSMNTAQTGSRIHRKLQRKQSSDYQAEFYLEKAAQI
NGHEFLIHGRADGVILRDQTATIEEIKTSDIEFKDIPENKLTLYWGQAQTYAYLLMNSHP
ELDEVKLHLTYVQTPDEIVTKTEKTISKTEATKFFNQLVSDYEEWLQLQDQLNAEKVTST
TQLTFPFGKYRAGQHELAAAVYKSALLNKHLFAEAPTGTGKTISTLFPAVKVLATEKIKR
IFYLTAKQSTRRVAEEAIGLMSNNGLKIRSITLTAKDKIKFPEEQEVAPEENPYMIGYYD
RLKPALKDLLLNNHQINRAVIEKYARQYTLDPFEFSLDASLFCDIIIGDYNHLFDPKVHL
QRFFEIENKENFYLIDEAHNLVDRSREMYSANLSNSAITDLLSLLHKDNENDQPVITKLR
SLQRNFKRIAKPLLEEQQTERDYLETDEKFTKSITNLVQVLRKWLAKQTPGDVTDKILDF
FFQCTTYLKIDEYFGPNFKFRVLLNKNQITVRLFCMDPSPFIADTLNLGGGAVLFSATLS
PMKYYTKVLGDEPESLKYQLPSPFDTKHQKIIITSYIDTTYNNREQSLDKIISSIYDLIK
EKKGNYLIFAPSNVYLEMVYDAFKTKFPEINTICQKPNMDDEQRTKFLQTFNQPQQQPVV
GFALLGGLFSEGIDLVGDKLIGVGIVGVGLPGLNTETNLIRDYFDADNGHGFEYAYQLPG
LNNVFQAAGRLIRGYQDQGIILLMDRRFTQRRYTELFPPTWRNYQIAHNLTELQNEIKNF
WKSDS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atagtgaacaagataggagtgcgcgacctagtcggcttcattttgcgaagtggtgatttg
gctaccagtcttagtagtatgaacacagctcaaactggttctcgtattcatcgaaaacta
caaaggaagcagtcaagcgactatcaggcagaattttatttagaaaaagcggcccaaatt
aatggtcatgaatttttaatccacggtcgtgctgatggagtaattcttagagaccaaacc
gctacaattgaagaaattaaaacatctgatatcgaattcaaagatattcctgaaaataaa
ttaaccctgtactggggtcaagcacaaacctatgcttatttactaatgaacagccatcca
gaattagatgaagttaaattacatctaacttatgttcaaactcctgatgaaattgttacg
aaaactgaaaaaacaatcagtaagactgaagctacaaaattttttaatcaattagttagt
gattatgaagagtggctccagttgcaagatcagttaaatgcggaaaaagttacttcaact
actcaactaacctttccttttggaaaatatcgagctgggcaacatgaattagctgccgcg
gtttacaaatcagccttacttaacaaacacctgtttgcagaagctcctactggaacggga
aaaaccatttctactctatttcctgcagtcaaagtattagcaactgaaaaaattaaacgg
attttctatctaactgctaagcaaagtacgcgacgggtagccgaagaagcaattggtctc
atgagcaataatggtttaaaaattcgaagtatcacgttaactgccaaagataaaatcaaa
tttccagaagaacaagaggttgctccagaagaaaatccttatatgattggatattatgat
cggttaaagccagccttaaaagatcttttgttaaataatcatcaaattaatcgcgctgta
attgaaaaatatgcacgccaatatacccttgatccatttgaattttcattagatgctagt
ttattttgtgatatcatcattggcgattataatcatttatttgatccaaaggtccactta
caacgtttttttgaaattgaaaataaggaaaatttttatttaattgatgaagcacataac
ctagtagatcgttcacgagagatgtattctgctaacttatctaattctgcaattaccgac
ttgctatctttgttacataaagacaatgaaaacgatcaaccagtaatcactaaactgcgc
agtcttcaaagaaatttcaaaagaattgcaaaaccacttctggaggaacaacaaaccgaa
cgcgattatttggaaacggacgaaaaattcactaagtcaatcacaaatttagttcaagtt
ttgcggaaatggctcgcaaaacagactccaggtgatgttaccgacaaaatacttgatttt
ttctttcaatgtacaacttatttaaaaattgatgaatattttggtcctaattttaaattc
agagtgttacttaataagaatcaaattactgttcgcttattctgtatggatcccagtcct
tttattgccgatactcttaatttaggtggcggtgccgttttattttctgctaccctatcg
cctatgaaatactacacaaaagtattaggtgacgagccagaaagtttgaaatatcaatta
ccatcaccatttgatactaagcaccaaaaaatcatcattacttcctacattgatacaaca
tataataatcgtgaacaaagtctcgataaaatcattagttcaatctatgacctcattaaa
gaaaaaaaaggtaattatttaatttttgcaccatcaaatgtatacttagaaatggtttat
gatgcttttaaaactaaatttccggaaataaatactatttgtcaaaaacccaatatggat
gacgaacaacgaactaagtttctacaaacatttaatcaaccacaacaacaaccagtcgtt
ggattcgcattgcttggaggacttttttcggaaggaattgatttagttggtgataaatta
atcggcgttggcattgttggcgttggtttgcctggcttaaacacagaaactaatttaatt
cgagattattttgatgcagataatggtcatggttttgaatatgcctatcagttacctgga
ttaaataatgtctttcaagctgcaggacgtttaattcgtggatatcaggatcaagggatc
attttactaatggatcgaagatttacacaacgacgttataccgaattatttcctccaact
tggcgcaattatcaaattgcacacaatctcaccgaacttcaaaatgaaatcaaaaatttc
tggaaatcagattcatag
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