Fructilactobacillus lindneri: AYR59_05270
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Entry
AYR59_05270 CDS
T04666
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
lle
Fructilactobacillus lindneri
Pathway
lle02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AYR59_05270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lle03021
]
AYR59_05270
Transcription machinery [BR:
lle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYR59_05270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
ANZ59844
UniProt:
A0AB33BRL6
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All DBs
Position
1054433..1055470
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AA seq
345 aa
AA seq
DB search
MGHITYNVLQQELQVPFDLSRKQMDELMEKIEDSGISIVDENGEPDARALKAAKKVTQKE
LKNASNSKGVKINDPVRMYLKEIGRVPLLTADEEVQLALRIEQGDESAKQELAEANLRLV
VSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYHKGFKFSTYATWWIRQAITRAIADQA
RTIRIPVHMVETINKLIRVQRQLLQDLGREPLPVEIGAEMDMPTAKVRNILKISQEPVSL
ETPIGEEDDSHLGDFIEDKDATSPEDHASYELLKEQLESVLDMLTDREENVLRLRFGLDD
GRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atcggtcacattacctataatgttcttcaacaagaattacaagttccatttgatttaagc
agaaaacaaatggatgaattgatggaaaaaattgaagattctgggattagcattgttgat
gaaaatggtgagccggatgcgcgtgctttaaaggctgctaaaaaggttactcaaaaagaa
cttaaaaatgcatctaattctaaaggtgttaagattaacgatccagttcgaatgtattta
aaagaaattggacgtgtgcctttattaactgctgatgaagaagttcagcttgcacttcga
attgagcaaggtgatgaatcagctaaacaagaattagcagaagctaacttacgactagtt
gtttcaattgcaaaacgttatgtaggacgtggaatgcaatttcttgatttaattcaagag
ggaaacatgggtttaatgaaagctgttgaaaaatttgattatcacaaaggatttaaattt
tcaacatacgctacttggtggattagacaggcaattactcgagcaattgctgaccaagcc
cgaacaattcgaattccagttcatatggttgaaaccattaacaaactgattagagttcaa
agacaattacttcaggatttgggtcgtgaacctttaccagttgaaattggtgccgaaatg
gatatgccaactgccaaagttagaaatatcttaaaaatatctcaagaaccagtctcactt
gaaactcctattggtgaagaagatgattctcatttaggggactttattgaagataaggat
gctactagtccagaagatcatgcttcctatgaattattaaaggagcagttagaaagtgtt
cttgatatgctgactgaccgtgaagaaaatgttttacgacttcggtttggtttagacgat
gggagaactagaacccttgaagaagttggaaaagtttttggagttacgcgtgaacgaatt
agacagatagaagctaaagcattacgcaaattaagacatccttctagaagtaaacaatta
aaagatttcttagattaa
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