KEGG   Fructilactobacillus lindneri: AYR59_05290
Entry
AYR59_05290       CDS       T04666                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lle  Fructilactobacillus lindneri
Pathway
lle03030  DNA replication
lle03430  Mismatch repair
lle03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AYR59_05290 (dnaE)
   03430 Mismatch repair
    AYR59_05290 (dnaE)
   03440 Homologous recombination
    AYR59_05290 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lle03032]
    AYR59_05290 (dnaE)
   03400 DNA repair and recombination proteins [BR:lle03400]
    AYR59_05290 (dnaE)
Enzymes [BR:lle01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AYR59_05290 (dnaE)
DNA replication proteins [BR:lle03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AYR59_05290 (dnaE)
DNA repair and recombination proteins [BR:lle03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AYR59_05290 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ANZ59465
UniProt: A0AB33BH76
LinkDB
Position
1057392..1060742
AA seq 1116 aa
MSYSLLQNISSYSLLQSTNTLPKLVNTAKDKGYTALALTDKNVMYGAVAFYKEASKHGIK
PIIGLTLSIQGTFLSEHSFDLVLLAKDQLGYQNLMRLSTLTMTNDSPLKLEQVGKLLHHL
FVLLPETSEASSLVTYDRSDDAFTYINELKRLVDDNAVKLGITDDFENNQFQQKKELSQN
TQIDLVALNPVSYLKAHDYFNTKVLKAIEAGTVLNNISEQKNDLGHDWLRTQKETEARYL
NHDLESALNVNEEIVESCNVTIPKEQPQLPHFENPNHESSDEYLRELCENGLKKIIKQHP
EQKIEYQDRLKHELDVINRMGFDDYFLIVWDVVNFAHIHHILTGPGRGSAAGSLVAYCLK
ITDVDPIEYDLLFERFLNEERAQMPDIDLDIPDDKRDEVLQYVHEKYGNDRVAQIITFGT
LGAKQSIRDVGRVFGMTPSEMSEWSKAIPNHLHETLNKAFQESQKLKNIVADQKINQTLF
ETASEIEGLPRHYSTHAAGLILSDKPIVEKAPLQSGNDGLLMTQYSKYYVEDVGLLKIDF
LGLRNLSIMANILQTIKKQGKLDFSISEINLNDPKTLKLFQDGKTDGVFQFESSGIKSVL
KRMHPDNFNLIAAVNALYRPGPMENIDTFIARKNGKEKVDYQNDAIKKILGSTYGIIVYQ
EQVMQLAATMGGFSLGQADVLRRAMSKKHRNEMDSMRERFINGSITNGYSKETAETTFEY
IERFASYGFNKSHAIAYSKMAFELAYLKAHFPGPFFAALLNSVLGNKNKIKNYVQEAKDN
QIKVLTPDINYSNPEFVYQNESIKFGFNAVKGLRSDFIKELIRIRKSSGLFTSLSDFINR
MEKKFRKEDQIKALIYAGAFDNFGYNRRELIEALPGLINSAELSGSLLESIPGLEVNIKR
KADFLDWEKINFENEYLGTFLSGHPVERYNDLKEQKHTYRINELHDGQKHVSAILLISHI
KVIRTKKGQLMAFIDGSDQFGTVDITIFPQLYAQIGQSLKQNMVVLVQGNVEKRRELQII
ADSIQPAANVVHQIENNRSVKNKKLFLQISEELDNKTVYEKMKNIFVENHGKTPIILYRK
KSRKKQILDHKFNIALNPKLIKELSDLLGKDNVVTR
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgtcatattctttattgcaaaacattagttcttatagtttattgcagagcactaatact
ttaccaaaattggttaatactgctaaggataaaggatacacagcgcttgctttaacggat
aagaatgtaatgtatggggcagttgcattttacaaagaagctagtaagcatggaattaaa
ccaattattggattaacattatcaattcaaggaacatttctttcagaacattcttttgat
ttggtactacttgctaaagatcaacttggatatcaaaatttaatgcgactatctaccttg
accatgacaaatgattcaccacttaaactagaacaagtaggaaaactattacaccatttg
tttgttttgttacctgaaactagtgaagccagttccttagttacttatgatcgatcagac
gatgcatttacttatatcaatgagttaaaacgactagtagatgataatgcagtaaagcta
ggaattactgatgattttgaaaataatcaattccaacaaaaaaaggaactaagtcaaaat
acacaaattgatttagtagcgttaaacccggtttcttatttaaaggcacatgattatttt
aatacgaaagttttaaaagctattgaagctgggacagttttaaataatatttctgagcaa
aaaaatgatttaggtcatgattggttgagaactcaaaaagaaactgaagctcgttattta
aatcatgatttagaatctgctttaaatgtaaatgaagagattgtagagtcatgtaatgtt
actattcctaaagaacagccgcagttaccacattttgaaaatcctaatcatgagtcttcc
gatgagtatttacgtgaattatgtgaaaatgggttaaaaaagattatcaagcaacatcct
gaacaaaaaatagaatatcaagatcgtctaaaacatgaactagatgttattaaccgaatg
ggttttgatgattattttttgattgtttgggatgtggttaattttgcacatatacatcat
attttaactggacctggaagaggttctgctgcaggatcattagtagcatattgtttaaag
attactgacgttgatccgatcgaatatgatttgttgtttgaacgttttttaaatgaagaa
cgagcacagatgcctgatattgatttggatattcctgatgacaaacgagatgaagtttta
caatacgttcatgaaaaatatgggaatgatcgtgtagcacagattattacatttggaaca
ttaggtgctaagcaatcaattcgtgatgtaggtagagtatttggaatgacacctagtgaa
atgtctgaatggagtaaggcaattcctaatcatctgcatgaaactttaaataaagcattt
caagaatcacaaaaattaaaaaatattgtagctgatcaaaaaattaatcaaaccttattt
gaaactgctagcgagattgaaggattaccaaggcattattctactcatgcagcaggtttg
attttaagcgataaaccaatagtggaaaaagcaccattgcaaagtggtaacgatgggtta
ttgatgacccaatattctaaatattatgttgaagatgttggtcttttaaaaattgatttt
ttaggtttgcgtaatttatcaattatggctaatattttacagacgattaaaaaacaaggg
aaacttgatttttcaatttctgaaattaatttaaacgaccctaaaacattaaaattattt
caggatggaaaaacagatggagttttccagtttgaatcttctggaataaaaagtgtctta
aaacgaatgcatcctgataatttcaatttaattgcagcagttaatgcattgtatcgtcct
ggaccaatggagaatattgatacttttattgctagaaaaaatgggaaagaaaaagttgat
tatcaaaacgatgctattaaaaagattctgggatcgacttatggaattattgtttatcaa
gagcaagttatgcagttagccgcgacaatgggtggattttctcttggacaagctgatgtt
ttaagacgagcgatgagtaaaaaacatcgaaatgaaatggattccatgagggagcgattt
attaatggttcaattaccaatggttatagtaaagaaacagcagaaactacttttgaatat
attgaaagatttgccagttacggatttaataagtcacatgcgattgcttatagtaagatg
gcttttgaacttgcttatttaaaagcgcattttccaggtcctttttttgcagcattactt
aactctgttttaggtaataaaaataaaatcaaaaactatgttcaagaagctaaagacaat
caaattaaggttttaactcctgatatcaattacagtaatcctgaatttgtttatcaaaat
gaatcaattaaatttggttttaatgccgtgaaaggtcttagatcagattttattaaagaa
cttattcggattagaaaatcgagtggtttatttaccagtttgtctgattttattaatcgt
atggaaaagaaatttcgtaaagaagatcaaattaaagcactaatttatgcaggagctttt
gataattttggttataatcgacgagaattaattgaagcacttcctggattaattaattca
gctgaattgtcaggttcgttattggaatcaattcccgggttagaggtaaatattaaaaga
aaagctgattttttggattgggaaaaaatcaactttgaaaatgaatatcttggaaccttt
ttatctggtcatccagttgaaagatacaatgatttaaaagaacagaagcatacttatcgt
attaatgaattgcatgatggacaaaaacacgtttctgcaattttgcttatttcacacatt
aaggtcattagaactaaaaaaggtcaattaatggcatttatcgatggaagcgatcaattt
ggaacggttgatatcacaatttttccgcaattatatgctcaaattggtcaatctctaaaa
caaaatatggtagtgctagttcaaggaaatgttgaaaaaagacgggaattgcaaattatt
gctgattcaattcagcctgctgcaaatgtagttcatcagatagaaaataatagaagtgta
aaaaataaaaaactttttttacagatttctgaagagctggataataaaacagtttatgag
aaaatgaagaacatttttgttgaaaaccacggcaagaccccaattattttgtatcgaaaa
aaatcaagaaaaaagcaaattttagatcacaaatttaatatcgctttaaatccaaaattg
attaaggaattaagtgatttattaggaaaagacaatgtagtaacaagatag

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