Fructilactobacillus lindneri: AYR59_06395
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Entry
AYR59_06395 CDS
T04666
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lle
Fructilactobacillus lindneri
Pathway
lle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYR59_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lle03019
]
AYR59_06395
Messenger RNA biogenesis [BR:
lle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYR59_06395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
ANZ59660
UniProt:
A0AB33BHD8
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All DBs
Position
complement(1265328..1266887)
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AA seq
519 aa
AA seq
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MLLAIIGCAAIAIIVGFLLGQYTHKRTVEKKLDAAHKNANDILADAKKQAQSEFKASTLK
AKEKGNAYRSKVEKGLKKRRADIQRQEDYLLKREEALDRKDRSFEKRDNNLNQQEEKLSN
EKKGLIKKQQDADALIAKRQEEVTRVASLTQEEARDLVIDETKKSLADVRAQMIKQNYES
AKKTSVRDAKNLIVEALQQSMADIVSETTVSVVTLPNDDMKGRIIGREGRNIRTFETLTG
IDLIIDDNPNAVVLSGFNPIRREIAKMALEKLIKDGRIHPARIEEMVEKSKKELKQQIQE
TGENVIFDLGIHSMNPDLIRLIGQLKYKISYGQNVLSRSIQVAKLAGVFAAELGEDVTLA
KRAGLLHEIGKASTSGADESYVDAGIDIAKKYGEDPVVIDAIRLGEPGSEPHSMVAELVE
VADRISIARPGAKSDSLESFVHRLEKLEAISNSFDEVEKSYAVQAGREIRVIAQPDKISD
SQAIVLAREIKDKIEKEMSHPGHAKVTVIREVRSVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcttttggctattattggatgcgccgctatcgctataattgttggatttttacttggt
caatatactcataaacgaacggttgaaaagaaattagatgccgctcataagaatgctaat
gacattcttgctgatgcgaagaagcaagcacaaagcgaatttaaagctagtactttaaaa
gcaaaggaaaaaggtaatgcataccgttccaaagttgaaaaagggttaaaaaagcgtcgt
gctgacattcaacgtcaagaagattatttattaaagcgtgaggaagcattagatcgtaaa
gatcgttcttttgaaaagcgtgataataatttaaatcaacaagaagaaaagcttagtaat
gagaaaaaagggctaattaaaaagcagcaagatgcagatgcacttatcgcaaaacggcaa
gaagaagtcactagagttgcttcactaactcaagaagaagctcgtgacttagtaattgat
gaaacgaaaaaatcattagctgatgttagagcacaaatgattaaacaaaattacgaatca
gcgaaaaaaacttctgttcgtgatgctaaaaacttgattgtggaagcattacaacaaagc
atggctgatatcgtttcagaaactaccgtgtctgttgtaaccttacctaatgacgatatg
aaaggaagaatcattggacgtgaaggtcggaatattagaacttttgaaactttaacagga
attgatctgattattgatgataatcctaatgcagtagttttaagtggctttaatccaatc
agacgcgagattgccaagatggcacttgaaaaattaatcaaggatggcagaattcatcca
gctcgaattgaagaaatggttgagaaaagtaagaaagaactcaaacaacagattcaagaa
actggagaaaatgtaatttttgatttagggattcattctatgaatccagatttaattaga
ttgattggtcagttgaaatataaaatttcttatggtcaaaatgttttatcacggtcaatt
caagttgctaagttggctggagtttttgcagccgagttaggtgaagatgttacattagca
aagcgcgcaggtttattgcacgaaattggaaaagcttctacaagtggagctgatgaatca
tatgtagatgcaggaatcgatatcgccaaaaaatatggtgaagatcctgtagtaattgac
gcgattcgtttaggagaacctggaagtgaaccacatagtatggttgctgagttagttgaa
gttgcagaccgcatctcaattgctagacctggtgctaaaagtgattcgctggagagcttc
gttcatcgtttagaaaaactagaagctattagcaatagttttgatgaagttgaaaagagt
tacgctgttcaagctgggcgtgagattcgagtaattgctcaaccggacaaaatttctgat
tctcaagctattgtattggcaagagaaattaaagataaaattgaaaaagaaatgagccac
cctggtcatgcaaaagtaactgtgattagagaagttcgttctgtcgattatgctaaatga
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