Leuconostoc lactis: BCR17_02325
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Entry
BCR17_02325 CDS
T04460
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
llf
Leuconostoc lactis
Pathway
llf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCR17_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llf03019
]
BCR17_02325
03009 Ribosome biogenesis [BR:
llf03009
]
BCR17_02325
Enzymes [BR:
llf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCR17_02325
Messenger RNA biogenesis [BR:
llf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCR17_02325
Ribosome biogenesis [BR:
llf03009
]
Prokaryotic type
rRNA helicases
BCR17_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
UvrA_inter
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY11314
UniProt:
A0AAP9EBF6
LinkDB
All DBs
Position
complement(489836..491392)
Genome browser
AA seq
518 aa
AA seq
DB search
MKFSELGLSQDILDAITTHGYVEATPIQEKTIPLTLAGKDVIGQAQTGTGKTAAFGLPIL
ENIDLDNKNIQALIVSPTRELAIQTADELKKLGHDKHVDVQVVFGGADIRRQIQNLKSHP
QILVGTPGRLLDHINRKTVKIDQVKTLVLDEADEMLNMGFLDDIEAIIKNTPADRQTLLF
SATMPPAIKRIGVKFMTDPEHIQIEAKELTTDLVDQYFVRARDNEKFDTMTRILDVQAPK
LAIVFGRTKRRVEELARGLEARGYHAAGLHGDLTQQMRSRVLSQFKSHEINILVATDVAA
RGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRAGAEGVSVTFVAPNEMDYLRAIEDLTKK
RMTPLQPATLQEARIGKIKNAAGEVSKLVNTVDADDIQSEVEKLTAQYSSEQLAAALLSS
VADLEKQNTPVEITRERPLPRRRGGNGGSSSRRSGSSDRRGNGDRRGGNRERRGNGGPRR
EGNGDRRFGDYKRRDGRSTERRTGGARKSREFTVREKD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttagtgaattaggtttatcacaagatattttggatgccattacaacacatggt
tatgtggaagcaacaccaatccaagaaaagacaattccgctaacattagcgggtaaagat
gttattggtcaagcgcaaacaggaactggtaagacagctgcctttggtttaccaatttta
gaaaacattgatttagataacaaaaatattcaagcattgatcgtgtcaccaacacgtgaa
ttagcaattcaaacagccgatgaattgaagaagttgggtcatgacaagcacgttgacgtg
caagttgtctttggtggtgcggatattcgccgtcaaatccaaaacttgaagtcacaccca
caaattttggtgggcacaccaggccgtttgttggatcatattaaccgtaagacagttaaa
attgatcaagtgaagacattggttttggatgaagccgatgaaatgttgaacatgggcttc
ttggatgacatcgaagccatcattaagaacacacctgcagaccgtcaaacattattgttc
tctgctacaatgccaccagcaatcaagcggattggtgtcaagttcatgactgaccctgaa
catatccaaattgaagctaaggaattgacaactgacttggttgatcaatactttgttcgc
gcacgtgataacgaaaagtttgacacaatgacacgtatcttggatgtacaagcacctaag
ttggcgattgtgtttggtcgtaccaagcgtcgtgttgaagaattggcccgtggtttggaa
gcccgtggttaccatgcagctggtttgcacggtgatttgacacaacaaatgcgttcacgc
gtgttgtcacaattcaagtcacacgaaatcaacattttggttgcaactgatgtggcagcc
cgtggtttggacgttaaggatgtgtcacacgtctataacttcgatattccacaagatcca
gaatcatacgttcaccgtattggccgtaccggtcgtgcgggggctgaaggggtgtcagtc
acttttgttgctccaaatgaaatggattacttgcgtgcaattgaagacttaactaagaag
cgcatgacaccgttgcaacctgcaacactacaagaagcacgtattggcaagatcaagaac
gctgctggtgaagtgtcaaagttggttaacacagttgatgctgatgacattcaatcagaa
gttgaaaagttgacagcacaatacagctcagaacaattggcagcggctttgttgtcatct
gttgctgatttggaaaagcaaaacacacctgttgaaatcacacgtgaacgaccattgcca
cgtcgtcgtggtggtaacggggggtcatcatcacgtcgcagcggtagcagcgatcgtcgc
ggcaatggtgatcgccgtggtggtaaccgtgaacgtcgcggtaatggtggtccacgtcgt
gaaggtaatggcgatcgtcgttttggtgattataagcgccgtgatggtcgctcaacagaa
cgccgtacgggtggcgcacgtaagagtcgtgaatttacagttcgcgaaaaagattaa
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