Leuconostoc lactis: BCR17_06410
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Entry
BCR17_06410 CDS
T04460
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
llf
Leuconostoc lactis
Brite
KEGG Orthology (KO) [BR:
llf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llf03019
]
BCR17_06410
03009 Ribosome biogenesis [BR:
llf03009
]
BCR17_06410
Enzymes [BR:
llf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCR17_06410
Messenger RNA biogenesis [BR:
llf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BCR17_06410
Ribosome biogenesis [BR:
llf03009
]
Prokaryotic type
rRNA helicases
BCR17_06410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
PrpR_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANY12023
LinkDB
All DBs
Position
1303406..1304770
Genome browser
AA seq
454 aa
AA seq
DB search
MAETANQFGQFNLKPEIIIALTKIGFTKPTPVQAKLIPAILQGKDVVGQSQTGSGKTHTF
LIPIFNQLEQDRQYVQAVITTPSRELAAQITKAAKDFASQLNPDITIAEYVGGTDKLRQI
KQLENNQPQIVIGTPGRIKDLVESGALKLHAVHTMVVDEADMTLDMGFLTEVDYIAGAMP
KDLQTLVFSATMPEKLKPFLKKYMANPLFEAIPVSTVIADTIENWLLATKSKDKNDVIYQ
VLTTGNPYLALIFANTKDRAKEIASNLRGRGLKVAEIHGDIEPRERRRVMKAIQNLEFQY
VVATDLAARGIDIEGVSHVINDDIPSELEFFVHRVGRTGRNGMPGLAITLYGPDEEDEVA
ELEALGIDFKAMQLKNGEFVPVKDRRARTQRVATTRKLDPTMVGMVKKKKKVVKPGYKRQ
IKSAIQRKNQMDRRIAKREEMRAVRKSNKKRGGA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactgcaaaccaatttggacaatttaatttaaaaccagaaatcattattgcg
ttgactaagattggctttaccaagccaaccccggtccaagcaaaattaattccagcgatc
ttgcaaggtaaggatgtcgttggccaatcacaaacaggttcagggaagacccacaccttt
ttgattcccatttttaaccaattagaacaagaccgacaatacgtacaggctgttattaca
acgccttcacgtgaattggctgctcaaattacaaaagcggccaaggactttgcctcacag
ctcaatcccgatattacaatcgctgaatatgttggtggcacagataagctccgccaaatc
aaacaattggaaaataaccaaccacaaattgtcatcgggacacctggccggattaaagat
ttggttgaatctggtgctttgaagctacatgctgtgcacacaatggtcgtcgatgaagcg
gatatgactcttgatatgggcttcttgacagaagtagattatatcgctggtgcgatgcca
aaagacttacaaacattggtctttagtgccacaatgccagaaaagctcaagccattctta
aagaaatatatggcgaacccgctttttgaagcgattccagtctcaacagtcattgccgac
accattgaaaattggttgttagccacaaagtcaaaagataagaacgatgtgatttaccaa
gtcttaacgactgggaacccttatttagcgctgatctttgccaataccaaggatcgagcc
aaagaaatcgcttctaatttgcgtggacgtgggttgaaggttgctgaaattcatggtgat
attgaaccacgtgaacgtcgtcgtgtgatgaaggcgattcaaaacttagaattccaatac
gttgtcgcaaccgacttggcggcgcgtgggattgatattgaaggggtttctcacgtcatt
aacgatgatatcccatcagaactggaattcttcgttcatcgtgttggccgaacaggtcgt
aatggcatgcctggtttggcgattacgttgtatggtccagatgaagaagacgaagtagca
gagcttgaagctttgggcattgattttaaggccatgcagttgaaaaacggggaattcgtg
ccggtaaaagatcgccgtgcgcgaacacaacgtgtcgcaaccacaagaaagcttgaccca
acgatggtggggatggttaaaaagaagaaaaaggtcgtgaagcctggctataagcgtcaa
attaagtcagctattcaacggaaaaaccaaatggatcgtcgtattgccaagcgtgaagaa
atgcgtgcagtacgtaagtcaaacaaaaagcgcggtggcgcctaa
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