Leuconostoc lactis: BCR17_06665
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Entry
BCR17_06665 CDS
T04460
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
llf
Leuconostoc lactis
Pathway
llf03410
Base excision repair
llf03430
Mismatch repair
llf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCR17_06665
03430 Mismatch repair
BCR17_06665
03440 Homologous recombination
BCR17_06665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llf03400
]
BCR17_06665
DNA repair and recombination proteins [BR:
llf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BCR17_06665
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BCR17_06665
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BCR17_06665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANY12071
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All DBs
Position
1355583..1357544
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AA seq
653 aa
AA seq
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MSQNNWRLLPQPAEKTVRQLTSQLNIAQLTATIVAQKGYTTPEAAFAYLQPSIDQLHDPM
QLRDLDKALERLMTAAFEGEKIVIYGDYDLDGVTSTAVMMEALQVLGADVTAYIPNRFQD
GYGPNLAAYQRLIADGAQVIVTVDNGVSGHEAVAYAMSQGVDVIITDHHEMGPTLPDAYA
IVHPRHPEGDYPFTDLSGVGVAFKLAQALLTDGEPVQDKSELPTEMLDLVALGEIADMVS
LTDENRTLVSWGLKQMAESPRPGIAALLKSAGQLPEQPIISETVGFKLAPRLNAVGRLGD
AQLALDLLLTQSPDDATALATQVEAINAQRQEIVEEVFGAAKQLALSDTHANDQVLVVAG
DDWHQGILGIVASRLVELIHKPVIVLSLVDGTYKGSGRTYGDFDLHALMGQYRDLYDTFG
GHASALGLGISPANLAILRERLSSLPALVIPEKQVAVNMMLPVNQLAPTLYDALKLMEPF
GTDNPEPVFGFQTPKIEKAMTMGATQQHVKLTLANQIEAVGFNHPDWTRIVQQPAGVSFA
ATLGLNYFRGQAKLQLLLADVALPEPVENTAHKQFFAQVYKFIYAHQDLNFGQNLAKIAK
QLQLSPKDLNIMIQVFIELGFVRIVDGYVKIIPNAPQKSLTTSVTYQKFLANR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaataattggcgtttactgccccaaccagcggaaaaaacagtccgccagctc
acgtcacaactaaatattgcccaattaacggccacgattgtggcgcaaaaaggctacacg
acacccgaagcggcgtttgcttatctccaaccgagtatcgaccaactgcatgatccaatg
cagttacgtgatttagataaagcgttggaacggttgatgacggctgcttttgaaggcgaa
aaaatcgtcatttatggtgattatgatttggatggggtgaccagtacggccgtcatgatg
gaagctttgcaagtgcttggggctgacgtaactgcctatattcctaatcgtttccaagat
ggctatgggccaaacttagcggcgtaccaacgtttgattgcagatggtgcgcaagtcatt
gtgacggttgataatggggtgagtggccacgaagcggtggcttatgccatgagtcaaggc
gtggatgtcatcatcaccgaccaccatgaaatgggcccaacgttaccggatgcctatgcc
attgtccatccaagacatccggaaggcgactatccatttactgatttatcaggggtcggg
gtcgcctttaaactggcccaagcgttgttaactgacggggaaccggtacaagataagagc
gaattgcccacggaaatgcttgatttggtggcgttaggcgaaattgccgatatggtatca
ctgacggatgaaaaccggacgttagtctcttgggggctgaagcaaatggcggaaagtcct
cggccagggattgcggccttattaaaaagtgcggggcaactgcctgagcaaccgattatt
tccgaaacggttggctttaagctggcgccacgtttgaatgctgttggtcgcttgggggat
gcgcagttagcattggatttgctactgacgcaatcaccagatgatgcgacggcattggcg
acgcaagtggaagctattaacgcgcaacgtcaagaaatcgttgaagaagtatttggcgca
gccaagcaattggcgttgtcggacacccatgccaacgatcaagttttagtggtggctggc
gatgattggcatcaaggtattttggggattgtggcaagtcgtctcgttgagttgatccac
aaaccagtgattgtcttgagtctggtcgatgggacgtataaaggctctggtcgaacgtat
ggcgattttgatttgcacgcgctcatgggtcaatatcgtgatttgtatgacacgtttggt
ggtcatgccagtgcgcttggcttaggtatttccccagcaaacttagctattctgcgggag
cggttatcaagtttaccagccttagtgatacctgaaaaacaagtcgcagtgaacatgatg
ttacctgttaaccaactggcgccaacgctttatgatgcgttaaagttaatggaacctttt
gggacggacaatccggaaccagtctttggtttccaaacgcctaaaattgaaaaagccatg
acaatgggggcaacccaacaacatgtcaagttaacgctagcaaatcaaattgaagcggtt
ggctttaatcatccagattggacgcgcattgtgcaacaaccggctggggtatcatttgcc
gccactttgggcttgaattacttccgggggcaagcgaagttgcagttgttattagcagat
gtggccttaccagaaccagtggaaaacacggcacataagcaattttttgcgcaggtttat
aagtttatttatgcccatcaagacttaaactttgggcaaaacttggcaaaaatcgctaag
caactccaactcagtcccaaagacctcaatattatgattcaagtctttattgagctggga
tttgtccggattgtggacggctatgttaaaattattccaaatgccccacaaaagtcattg
acaacatcagtgacctatcaaaaatttttggctaatcgttaa
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