Legionella lansingensis: 44548918_00230
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Entry
44548918_00230 CDS
T05543
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
llg
Legionella lansingensis
Pathway
llg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
44548918_00230 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llg03021
]
44548918_00230 (rpoC)
03400 DNA repair and recombination proteins [BR:
llg03400
]
44548918_00230 (rpoC)
Enzymes [BR:
llg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
44548918_00230 (rpoC)
Transcription machinery [BR:
llg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
44548918_00230 (rpoC)
DNA repair and recombination proteins [BR:
llg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
44548918_00230 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Mis14
Motif
Other DBs
NCBI-ProteinID:
SNV45074
LinkDB
All DBs
Position
1:246231..250463
Genome browser
AA seq
1410 aa
AA seq
DB search
MANLEPMRKPPVMSDLLGILKQQGQSEEFDAIKIALASPDLIRSWSYGEVKKPETINYRT
FKPERDGLFCAKTFGPVKDYECLCGKYKRLKHRGVICEKCGVELALAKVRRERMGHIELA
SPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFEAFVVVDPGMTELERGQLLNDEAYLDA
MEQYGDEFDARMGAEAIRDLLRQIDLDEEVSTLREELPTTNSETKIKKITKRLKLLEAFQ
ESGNKPEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAP
DIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVD
YSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFSKLEFRGLATTIKAAKKMVEREDPVV
WDILDDVIREHPILLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAYNADFDGDQMAV
HVPLTLEAQLEARSLMMSTNNILSPASGEPIIVPSQDVVLGLYYLTRERIGAKGEGKIFA
SAQEAQNFYEAGYVDIHAKVKIRMPHEEGEGYQLVETTVGRAILSDLLPKGMSFSLINRA
MTKKAITKVVDTCYRKFGLKETVIFADQLMYTGFKFATRAGASIGIEDMEIPDDKAAIIE
QADNEVREIETQYRSGLVTNGERYNKVIDIWSRTNEMVAKSMMTKIATEEVTTPDGKIAR
QESFNPIFMMADSGARGSAAQIRQLAGMRGLMAAPDGSIIETPITANFREGLNVFQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDVVITEDDCGTEHGILMQPLIEGGDIVEPL
HERVLGRVVATDVYIPNEKEPIVTAGTLLDEDWVEKLEKFGVDQVLVRSPITCETRFGLC
AKCYGRDLARGHLVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASRATAANNIQIKNK
GVIRLHNIKTVSHENSNLVAVSRSGEVSIADDFGRERERYKLPYGAVLTVHDNMSVEAGQ
IIATWDPHTHPVISEVSGRLKFVDLIEGLTMNRQTDELTGLSNIVVIDAKQRSAAGRDLR
PMVKLVSDDGEDIYLAGTNVPAQYYLPVDAIINFEDGSTVGIGDVIARIPQERSKTRDIT
GGLPRVADLFEARKPKDAAVMAETSGLVNFGKETKGKRRLIITASEHEYHEELIPKWRHI
SVFEGEHVERGEVIADGPLNPHDILRLLGVGALANYIVNEVQDVYRLQGVKINDKHIEVI
VRQMLRKRVITSAGDSKFLVGEQVEESVMLQENDKLLADGKQIAEGTPILLGITKASLAT
ESFISAASFQETTRVLTEAAVSGKVDDLRGLKENVMVGRLIPAGTGYAYHQSRKAKRARA
AGVEPSTHTVTASDVEHALSEALNADHNEH
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
ttggctaatctcgaacctatgagaaaaccacctgtaatgagtgatttgcttggcatcctc
aaacagcaaggtcaaagtgaagaatttgatgcaatcaaaattgcactggcttcaccggat
ttaattcgttcatggtcctacggcgaagttaaaaagcctgagactatcaactatcgcacg
ttcaaaccagaacgtgatggattgttttgtgccaaaacatttggcccagtcaaagactat
gaatgcttatgtggtaagtataagcgtctcaagcaccgcggagttatctgcgaaaaatgc
ggcgtggagctcgcattggctaaagtacgccgggaacgcatggggcatattgagcttgca
agcccagtggctcatatctggttcctcaaatcgttgccatcacgaattggtctattactc
gatatgactttacgcgacattgaacgtgtcctgtactttgaagcttttgtcgtagttgac
ccaggcatgacggaactggagcgcggccagctactaaatgatgaagcgtacctcgatgca
atggagcagtatggtgatgaattcgatgctcgtatgggtgcagaagcaatccgtgattta
ctgcgtcaaattgatcttgacgaagaagttagcacactacgtgaagagttaccgacaacg
aattccgaaacgaaaatcaaaaagattactaagcgattgaagctgctagaagcgtttcag
gagtcaggcaataaacctgagtggatgattatggatgttctccccgttctgcctcctgat
ttacgtcctctagtacctttagatggtggacgttttgctacctctgatctaaatgacctc
taccgtcgagttattaatcgtaataaccgcttgaagagactacttgatcttagtgcgcct
gatattattgtgcgcaatgaaaaacgcatgctgcaagagtcagttgatgctttgctcgat
aatggtcgtcgtggccgtgctattactggaacgaacaagcgtcctttaaaatcattggca
gacatgattaagggtaagcaaggccgctttagacagaatctccttggtaaacgtgttgac
tattcaggacgttcagttatcgtggtcggcccaacattgcgtcttcaccaatgtggttta
cccaaaaagatggcactagagcttttcaaaccgttcatttttagcaagcttgaatttaga
ggtttagcaaccacgattaaagctgctaaaaaaatggttgagcgtgaagacccggtggtt
tgggatattttggatgatgttattcgtgagcatccgattctcttgaaccgcgcacctacc
ttgcacaggttaggtattcaggcttttgaacccgttttaattgaaggcaaagcgatacag
cttcatcctttagtttgtaccgcttataacgcggatttcgacggtgaccaaatggctgtt
cacgtgcccttaacgctggaagcccagttagaggcacgttcgctcatgatgtcaactaac
aatattttatcaccagcgagtggtgagccaattattgttcctagccaggacgtggtacta
gggctttattatttaacgagagaacgtataggcgcgaaaggtgaaggcaaaatttttgcc
agtgcacaagaagcgcaaaatttctatgaagcaggttatgttgatattcatgccaaagtg
aaaattagaatgccgcatgaagagggagagggatatcagttggtggaaacaaccgtcggc
cgtgctattctctcagatcttttacctaaaggaatgtcattttctttaatcaacagagca
atgactaaaaaggccatcaccaaagttgttgatacttgctatcgtaagtttggtctgaaa
gaaacggttatctttgcagaccaactgatgtataccggctttaaatttgctaccagagct
ggagcgtctattggtatagaagatatggaaatccctgacgataaagccgccatcattgaa
caagccgacaatgaggtgcgtgagattgaaacacaatatcgttcaggattagtaaccaac
ggcgaacgatacaataaggtcattgacatttggtcacgtaccaatgaaatggtggctaaa
tcaatgatgacgaaaattgctacagaagaagtcacaacgcctgatggtaagatagcgcgc
caagaatcgttcaatcccatctttatgatggccgactctggtgctagaggatccgcagct
cagattagacagttggcaggaatgcgagggttaatggctgcgcctgatggctcgatcatt
gagacaccaattacagctaatttccgtgaaggcttaaatgttttccaatactttatttcc
actcacggagcacgtaaaggtctggctgacactgcgttaaaaacggcaaactcaggttat
ttaacacgtcgtctggtggatgtggcacaagacgttgtcattactgaagatgattgcggt
acagagcatggtattttaatgcaaccgttgattgaaggtggagacattgttgaaccactg
catgagcgtgtgcttggtcgtgtagtggctactgacgtctatattccaaatgaaaaagaa
cccatcgtcaccgcaggtacattgttggatgaagattgggtggaaaaacttgagaaattt
ggtgttgaccaagtactggtaagatctcccattacttgtgaaaccagatttggactttgt
gcaaaatgttatggtcgtgatttggcgcgtggtcatctagttaataccggggaggctgtg
ggtattattgctgcacaatccatcggtgaacctggaacacagttaacaatgcgtactttc
catattggaggtgctgcatcaagagcgacggcggctaacaacattcaaattaagaataaa
ggggtcatccgtttacataacattaaaaccgtatcccatgaaaatagtaatcttgttgct
gtttctcgttctggggaggtatccatcgctgatgattttggtcgtgagcgtgaacgttac
aagttaccatacggtgctgtattaacggtacatgacaatatgtctgtcgaagctgggcaa
attattgccacctgggatccacatacacacccagtgatttcagaagttagcggtaggttg
aaatttgtagaccttatcgaaggcctgaccatgaatcgccaaacagatgaattaacaggt
ttaagcaatatcgtcgttatcgatgccaagcaacgcagtgccgctggccgagatctgcgt
ccgatggtgaaattggtctctgacgatggtgaggatatctacttggcaggtacaaatgtt
cctgctcaatattatttgcctgtcgatgcaatcattaattttgaagatggtagcactgtt
ggtattggtgatgttattgctcgtatcccgcaagaacgttccaagacgcgtgatattacc
gggggattaccaagggtagctgatctcttcgaggccagaaaaccaaaagatgctgctgtc
atggcggagacttctggattagtgaactttggcaaagagacaaaaggtaaacgacgtcta
attattactgcatctgaacatgaatatcatgaagaattgattcctaaatggcgccatatt
tcagtttttgaaggtgaacatgtggagcgtggtgaggttattgccgatggcccgctcaat
cctcatgatattttacgtttgcttggtgttggagcattggcaaattatatcgtcaatgag
gtacaagacgtttaccgcttacaaggggtaaaaatcaatgacaaacacattgaagtgatt
gtaagacaaatgctgcgtaagcgagtgataacttcagccggggactcgaaattcctggtg
ggtgaacaagttgaagaaagcgtcatgctccaagaaaacgataagttgcttgctgatggt
aagcaaattgcggagggaacaccaattctgctgggtatcaccaaagcttcattggcgacc
gaatcctttatttccgccgcttctttccaagagacgactcgggtcttaaccgaagctgct
gtcagtggaaaagttgatgatttgcgtggtttaaaagaaaacgtaatggtaggtcgcttg
atcccagccggaactggttatgcctatcatcaaagccgcaaggctaaacgcgctagagct
gctggtgtagagcctagcacgcatacggtgactgctagtgatgtagaacatgcattgagc
gaagcgctgaatgcggatcacaatgagcattaa
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