Lacipirellula limnantheis: I41_00300
Help
Entry
I41_00300 CDS
T09857
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
llh
Lacipirellula limnantheis
Pathway
llh00071
Fatty acid degradation
llh00280
Valine, leucine and isoleucine degradation
llh00310
Lysine degradation
llh00362
Benzoate degradation
llh00380
Tryptophan metabolism
llh00410
beta-Alanine metabolism
llh00640
Propanoate metabolism
llh00650
Butanoate metabolism
llh00907
Pinene, camphor and geraniol degradation
llh00930
Caprolactam degradation
llh01100
Metabolic pathways
llh01110
Biosynthesis of secondary metabolites
llh01120
Microbial metabolism in diverse environments
llh01200
Carbon metabolism
llh01212
Fatty acid metabolism
Module
llh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I41_00300 (fadB)
00650 Butanoate metabolism
I41_00300 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I41_00300 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I41_00300 (fadB)
00310 Lysine degradation
I41_00300 (fadB)
00380 Tryptophan metabolism
I41_00300 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I41_00300 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I41_00300 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I41_00300 (fadB)
00930 Caprolactam degradation
I41_00300 (fadB)
Enzymes [BR:
llh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I41_00300 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I41_00300 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I41_00300 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I41_00300 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDT70877
UniProt:
A0A517TR75
LinkDB
All DBs
Position
complement(39207..41348)
Genome browser
AA seq
713 aa
AA seq
DB search
MADGLLFHLESPASDIAVITINDPKKGANILSRPALAELDGLLTSLEKRTDLAGLIIRST
KPGNYIAGADLREFVADIDAPAEQIVEISRRGQQLFARLSKTPFVTIAAIEGICVGGGAE
LAVWCDRRIMAAGGDTGFGFPEVKIGIYPGWGGTARAPRIIGLSNAIEIITSGENIDAQT
AAAMGLVSDVTAGGDALLNAAIRLARAEQQSKEYLEDRCRWFGPINISETELGFLGATAS
AYIQGQTKGHYPAPLAALEVMIGSAGVDVETACHMEAEGFPQLFGSPVNRALLNVFFLRD
LNKKAGAGKGTPRDIRSVSVIGAGVMGQGIAAANIKRGIPVALGDTNADAVGRGVQGILT
EASFNKQTKGPDVAKALALSPLINGTMSDAELAAADLVVEAIYENAEAKRELYARLEKKL
PAHAVLCSNTSTIPISDLAAGLVRPEQFCGLHFFNPVRKMPLVEVIRGRATSDDTIATAA
AYARRIGKSPIIVNDGPGFLVNRVLLPYMNEALLLLEEGASIKSVDRAATAFGMPMGPIT
LYDTVGLDVALHAGGVMRAAFPDRVVPSTILPAMVEAGRIGKKRGGGFFNYSGKRNDHGS
ESPEAAAVIDANRRGEKKFAHEELADRLLLPMLLEATRVLEDGVAANVRDVDLALIYGIG
FPPFRGGLFFWADTIGAKTIVEKLKAYESLGARFAPTKLLLEHAKSGKKFYDA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtttgctcttccacctggagtcgcccgccagcgacatcgcggtcatcacg
atcaacgatccgaagaagggcgccaacatcttgtcgcggccagcgctggccgaactcgac
ggcttgctcacctcgcttgagaaacggacagatctcgccggcctgatcattcgctccacg
aagcctggcaactacatcgctggcgccgacctgcgcgaattcgtcgccgacatcgacgcc
ccggccgagcaaatcgtggagatctcgcgccgcggccagcagctctttgcacggctctcg
aagacgccgttcgtcaccattgcggcgatcgaaggcatctgcgtcggcggcggcgccgag
cttgccgtctggtgcgatcgacgcatcatggccgccggcggcgatacgggcttcggcttc
cccgaagtaaagatcggcatttatcccggatggggcggtacggcgcgtgcgccgcgaatc
atcgggctaagcaacgcgatcgagatcatcaccagcggcgagaacatcgacgcccagacc
gcggcggccatggggctcgtcagcgacgtgacggctggcggagacgcactgctgaacgcg
gccatccgacttgcccgcgccgagcagcaaagcaaagagtacctggaagaccgctgccgc
tggttcgggccgatcaacatcagcgaaacggaacttggcttcctcggcgccacggcgagc
gcctatatccagggccagacgaaaggccactacccagccccgctcgccgcgctggaggtg
atgatcggttcggccggcgtcgacgtcgagacggcctgccacatggaagccgaaggcttc
ccgcaactctttggctcgcccgtcaatcgcgcattgctcaacgttttctttctgcgcgac
ctcaacaagaaggccggcgccggcaagggaacgccccgcgatattcgctcggtcagcgtc
atcggcgccggcgtcatggggcaggggattgcggccgccaacatcaagcgcggcatcccg
gttgctctcggcgacacgaatgccgacgccgtcggacgcggcgtccagggcattctcacc
gaagcgagcttcaacaagcaaaccaagggccccgacgtcgccaaggcgctcgccctttcc
ccgctgatcaacggcacgatgagcgacgccgagttggccgcggcagatctggtggtcgaa
gcaatctacgagaacgccgaggcgaagcgcgaactctatgcccggttggagaagaagctg
ccagcccacgccgtcctttgctccaacacgtcgaccatccccatcagcgacctcgccgcc
ggactcgtgcgacccgaacagttctgcggccttcacttcttcaaccccgtccgcaagatg
ccgctggtcgaagtcatccgcggccgcgccaccagcgacgacacgatcgccaccgccgcg
gcctatgcgcggcgcatcggcaagtcgccgatcattgtcaacgatggcccgggtttcctg
gtgaaccgcgtgctgctgccgtacatgaacgaagcgctgctgctgctcgaagagggcgcc
tcgatcaaatcggtcgaccgcgcggccaccgcgttcggcatgccgatggggccgatcacg
ctttacgacaccgtcgggctcgacgtcgcgctccacgccggcggcgtcatgcgggcggcg
ttccccgatcgcgtcgtgccgtcgaccattctgccggcgatggtcgaagcgggccgcatc
ggcaagaaacgaggcggcggctttttcaactactccggcaagcgaaacgatcacggctcc
gagagccccgaagcggcggcggtcattgacgcgaaccgccgcggcgagaagaagttcgcg
catgaggaactcgccgaccggctgctgctgccgatgctgctcgaagcgacccgcgttttg
gaggacggcgtcgccgccaatgtccgcgacgtcgacctcgcgctgatctacggcatcggc
ttcccaccgttccgcggcggcctcttcttctgggccgacacaatcggcgcgaagacgatc
gtcgaaaaactcaaagcgtacgagtcgctcggcgcacgcttcgcgccgaccaaactcctg
ctggaacacgcgaagtccggcaagaagttctacgacgcgtag
DBGET
integrated database retrieval system
