Lacipirellula limnantheis: I41_01080
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Entry
I41_01080 CDS
T09857
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llh03032
]
I41_01080 (gyrA)
03400 DNA repair and recombination proteins [BR:
llh03400
]
I41_01080 (gyrA)
Enzymes [BR:
llh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I41_01080 (gyrA)
DNA replication proteins [BR:
llh03032
]
Prokaryotic type
DNA Topoisomerases
I41_01080 (gyrA)
DNA repair and recombination proteins [BR:
llh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I41_01080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QDT70954
UniProt:
A0A517TRF5
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All DBs
Position
complement(137953..140715)
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AA seq
920 aa
AA seq
DB search
MSTDNPDGPDAPKFPGVPNGFNDQEQNIAARLIDMPIEDELKESYLTYAMSVIVSRALPD
VRDGLKPSQRRILVAMNDLNLTPGAARVKCAKISGDTSGNYHPHGESVIYPTLVRMAQEW
NMRHILIDKQGNFGSIAGLPPAAMRYTEARMSAFAALMLDDLKLDTVDFVPTYDERHQEP
TVLPSKFPNLLVNGSGGIAVGMATSIPPHNLAEVCHGLIALIDNPATTVGELMEHIQGPD
FPTGGIICGRTGIRRGYMTGRSTVVVRARTTIDDSGKKSRILVHEIPYQQSRDAVILKIA
ALSNDGKIPGIADVRDESDLKEPVRIIIELKRDADPDVVLNQLYKFSPLQDTISIILLAL
VDGKPRILTLKEMLEEFLRHRITVIRRRTQFQLARARKRKHTVQGLLLAHANIDEVIRVI
RSSKTQPEAKERLMQIMTPGAMLKRALGDEGYAQFQVERGVAEEYALTPVQADAILRMTL
GQLVNLEQEKLADEHAELLAEIIDLSGILASPARINGIIRDDCEMLIKRADARRTEISGE
EIGEVDLEDLIEEETMVVSISHQGYIKRTPASTYRAQRRGGKGIKGAKTDEDDPVEHLFV
TSTHDYLLFFTNLGKCYWQKVYNLPALSRESKGRAVVNLLNLAEGEKIADCRAIRDFDLP
DHCLMMATRKGLVKKTLLKAYGRPMKTGIIAIKLKEGDELVDVVVTKPGDEIILATSQGM
AIRFSEADARPMGRNSSGVKGISLGKNDSLVGMVVADPDATLLTACLNGYGKRTPFGPNA
APGEIEPLPDDAGEGAAPSAEAPASSNQQPASDEAEGESSSGFRYRTQNRGGKGLRDIKT
TDRNGPVVSIVRVDDTEELLMMTARGKIQRIKVSDLNIIGRNTQGVRIMSLDEADTLAAV
VRVPQEEGGGEEPAEATEET
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgataatcccgatggacctgacgctccgaagttccccggcgttccgaacggc
ttcaacgatcaagaacaaaacatcgccgcccgtctgatcgacatgccgatcgaggacgag
ctgaaggagagctatctcacctacgcgatgagcgtcatcgtcagccgcgcgcttcccgac
gtccgcgacggtctgaagccctcgcagcgccgcattctggtcgccatgaacgacctgaac
ctcacccccggcgccgcccgcgtgaagtgcgcgaagatctccggcgacaccagcggtaac
tatcacccccacggcgaatcggtcatttaccccacgctcgtccgcatggcccaagagtgg
aacatgcggcacatcctcatcgacaagcagggcaacttcggcagcatcgccggcctcccg
cccgcggccatgcggtacaccgaagcccgcatgtcggccttcgcggcgctgatgctcgac
gatctgaagctcgacaccgtcgacttcgtcccgacctacgacgagcggcatcaggaacca
accgtcctgccgtcgaagttcccgaacctgctggtcaacggctccggcggcatcgcggtc
ggcatggccaccagcatcccgccccacaacctcgcggaggtctgccacggcctgatcgcg
ctgatcgacaacccggccacgaccgtcggcgagttgatggaacatatccagggccccgac
ttccccaccggcggcatcatctgcggccgcaccggcatccgccgcggctatatgaccggc
cgcagcaccgtcgtcgtccgggcccgcaccacgatcgacgacagcggcaagaagtctcgc
attctcgtccacgagatcccgtaccagcaatcacgcgacgcggtgatcctaaaaatcgcc
gccctcagcaacgacggcaagatccccggcatcgccgacgtccgcgacgagagcgacctg
aaggaaccggtccggatcatcatcgaactgaagcgcgacgccgatcccgacgtcgtgctc
aaccagctctacaaattctcgccgctgcaggacacgatttcgatcatcctgctggccctg
gtcgacggcaaaccgcggattctcacgctcaaggagatgctcgaggagttcctgcggcat
cggatcaccgtcatccgacggcggacgcaattccagctcgctcgcgctcgcaagcgcaag
cacacggtccagggcttgctgctggcccacgcgaatatcgacgaagtgatccgcgtcatc
cgctcgtcgaagacgcagcccgaggcgaaagaacgcctcatgcagatcatgacgcccggg
gcgatgctcaagcgggccctcggcgacgaggggtacgcgcagttccaagtcgaacggggc
gtggccgaagagtacgcgctcaccccggtccaagccgacgccatcttgcggatgacgctc
ggacagttggtgaatctcgagcaggagaagctcgccgacgagcacgcggagctgctggcc
gaaatcatcgacctcagcggcatcctcgccagcccggcccgcatcaacggcatcatccgc
gacgattgcgagatgctgatcaagcgggccgacgcccgccgcaccgaaatcagcggcgaa
gagatcggcgaggtcgacctggaagacctcatcgaagaagaaacgatggtcgtctcgatc
agccaccaaggctacatcaagcggactccggcgagcacctaccgcgcccagcgccgcggc
ggcaagggaatcaagggcgccaagaccgacgaggacgatccggtcgagcacctcttcgtc
accagcacgcacgattacctgctcttcttcacaaacctcggcaagtgctactggcaaaag
gtctacaacctgccggccctctctcgcgagagcaaaggtcgcgcggtcgtgaacctgctc
aacctcgccgagggtgaaaagatcgccgactgccgcgcgatccgcgacttcgatctcccc
gaccattgcctgatgatggcgacgcgtaagggactcgtgaaaaagacgctgctcaaggcg
tacggccggcccatgaagacgggcatcatcgccatcaagctgaaagagggcgacgaattg
gtggacgtggtggtcaccaagcctggcgacgagatcatcctcgccacctcgcaagggatg
gcgatccgcttcagcgaagccgacgcgagacccatgggtcgcaactctagcggcgtgaag
gggatcagcctcggcaaaaacgactcgctcgtcggcatggtcgtcgccgaccccgacgcg
acgctgctgaccgcctgcctcaacggctacggcaagcggacccccttcggccccaacgcc
gcccccggcgagatcgaacccctacccgacgacgcgggcgaaggagccgcaccgtctgct
gaggctccagcatccagcaaccagcaaccagcatccgacgaagccgaaggcgaatcctcc
tcgggcttccgctaccgcacccagaaccgcggcggcaaggggcttcgcgacatcaagacg
accgaccgcaacggccccgtggtaagcatcgtccgcgtcgacgacacggaagagctgctg
atgatgaccgcccgcggcaagatccagcgcattaaggtgagcgacctcaacatcatcggc
cgcaacacccagggggtgcgcatcatgtccctcgacgaagccgacaccctcgctgcggtg
gttcgcgtcccacaggaagaaggcggtggtgaagaacccgccgaagcgaccgaagaaacc
taa
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