Lacipirellula limnantheis: I41_03120
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Entry
I41_03120 CDS
T09857
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
I41_03120 (dbpA)
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GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QDT71157
UniProt:
A0A517TS06
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Position
379614..382025
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AA seq
803 aa
AA seq
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MDVAALLERVRARRDYAGQIEHVEVLSERPGKFAEPATPLPEPLMRLLAARGIEQLYSHQ
VAALEAARARRDLVVVTGTASGKTFCYNLPILESALAGTNSRALYLYPTKALAQDQLKGL
LELTAGDAELAAAIRPGVYDGDTPTAQRRRIRHEANLVLSNPDMLHASVLPYHPKWADFF
TDLRYIVIDEVHTYRGILGAHVSAVLRRLLRVCRHYGSEPTFLATSATIANPGELVSRLI
GREVDVIDDDGSPRGRKYFALWNPAPLGVDALARRSANDDAVMWLEEAVEAEGQALAFTR
TRQSAELIHRYLRDALDAKRSKHADKVRAYRGGYLPNERREIEQDLFAGRLRAVAATNAL
ELGIDIGSLDVALLVNYPGTIASCWQQAGRSGRRHDESLAVLLAGNDPVDQYLLRRPEYF
FAQSPEHAVVDPDNPYVLARHLKAAAFELPLEDDDLATFGPLSAPIIDALCREQQLAEVR
GAYYHPGGQNPTIGVSLRHMSDNTFSIVLVEGGRGKTERGSFGSPSQVPKSVTAHSVLAN
VDSISAPELVYPEAVYLHNGETYLVRELDLNGKIAYVERRETDYYTQAVLESSVVVTAAR
ATSDAVPRAALVYGDVDVSWQTVAFKKIKFATRENIGLGPVDIPAQQLQTTALWLTPDDS
VRADLKAAGLRASEGIVGLRNLAVVALPFVAMCDSRDLGGVVNSHNTGKPTMILYDRYPG
GLGYSEKGFARIDQLLEICREMVSSCPCEAGCPSCVGLPNHRPAIHSDLDLTRGHPMPDK
AATQMMLELLCARSGVAAATAGV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcagcattgctggaacgagttcgagcccggcgcgattatgccggtcagatc
gaacatgtcgaggtcctttcggaacgccctggtaagttcgccgagccggccacgccgctg
ccagagcctctcatgcggctcctggcggcccgcgggatcgaacagctctattcacaccaa
gtcgccgccttggaggccgctcgggcccgtcgcgatttggtggtggtcaccggcaccgcc
agcgggaaaaccttctgctacaacctgccaattctggaatctgccctggcggggaccaac
tcgcgggccctttatctctaccctacgaaggcactcgcccaggaccagctcaagggccta
ctcgaactcaccgcgggagatgcggagctcgccgccgcgattcgccccggcgtttatgac
ggcgacacgccgaccgcccaacgccgccgcattcgccatgaagcgaatctggtgctctcg
aaccccgacatgctccatgcgtcggtcttgccttaccatccgaagtgggccgacttcttc
accgatcttcgctacatcgtcatcgacgaggttcacacctatcgcggcatccttggggcc
cacgtctccgccgtgctgcggcgactgctgcgagtctgccgacactacggcagcgagccg
actttcttggccacgagcgcgacgatcgcgaaccctggcgagctcgtcagccgattgatc
ggtcgcgaggtcgacgtgatcgacgacgacggctcgccgcgcggccgcaagtatttcgcg
ctctggaaccccgctccgctgggcgtcgacgcgctcgcccgccgcagcgcgaacgacgac
gcggtgatgtggctggaggaagcagtcgaagccgagggccaagcgctcgcgtttactcgc
acgcggcaaagcgccgagctgattcaccgctacttgcgcgacgcgctcgatgcgaaacgc
tcgaagcatgccgacaaggttcgcgcgtatcgcggcggctacctaccgaacgaacggcgc
gaaatcgagcaagacttatttgccggccgactgcgagccgtggccgcgacgaatgccttg
gaacttggcatcgacatcggttcgctcgacgtcgccctgctggtgaactaccccggcacg
atcgccagttgttggcagcaggcggggcggagcggccgccggcatgacgagagcctcgcc
gtgctgctcgccggcaacgaccccgtcgaccagtatctgctccgccggcccgagtatttc
ttcgcccagtcgcccgaacatgcggtggtcgatcccgacaatccctacgtgttggcccgg
catctcaaggccgcggcgttcgaactgccgctcgaagacgacgaccttgccacgttcggg
cccttgtcggcgcctatcatcgacgccctctgccgtgagcagcaactcgccgaggtgcgc
ggcgcttactatcatcccggcggccaaaatcccacgatcggcgtcagcctccgccacatg
agcgacaatacgtttagcatcgtgctcgtcgaaggaggacgggggaagacggaaagggga
agttttgggtcgccgtcgcaagttccaaagtcagtaacagcccactcggtactcgccaac
gtcgattcgatcagcgccccggagctcgtctatcccgaggctgtttaccttcacaacggc
gaaacctacctcgtccgcgagctcgatctcaacggcaagatcgcttacgtcgaacgccga
gagaccgactactacacgcaggcggtgctcgaaagcagcgtcgtcgtcaccgccgcgcgc
gcgacgagcgacgccgtgccgcgggcggcgctggtctacggcgacgtcgacgtcagttgg
cagacggtggcgttcaagaagatcaagttcgccacccgcgagaacattggtctcggtccc
gtcgacattcctgcgcagcaattgcagaccaccgccctgtggcttacgcccgacgattca
gttcgcgctgacctcaaggccgcagggctccgcgcgagcgagggcatcgtgggccttcgc
aatctggccgtcgtcgccctgcccttcgttgcgatgtgcgacagccgcgacctcggcggc
gtcgtcaacagccacaacacggggaagccgacgatgattctctacgaccgttaccccggc
ggactcggctacagcgagaaaggctttgcgcggatcgaccagttgctggagatctgccga
gagatggtgtcgagctgcccctgcgaagcgggttgcccgagttgcgtcgggctgccgaac
caccgcccggcgattcacagcgatctcgacctgactcgaggtcacccgatgcctgacaag
gcggcaacgcaaatgatgttggagttgttatgcgcgcggagcggggtcgcggcggctacg
gctggggtttga
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