Lacipirellula limnantheis: I41_05930
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Entry
I41_05930 CDS
T09857
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
llh
Lacipirellula limnantheis
Pathway
llh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I41_05930 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llh03400
]
I41_05930 (yfhQ)
Enzymes [BR:
llh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
I41_05930 (yfhQ)
DNA repair and recombination proteins [BR:
llh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I41_05930 (yfhQ)
Prokaryotic type
I41_05930 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
NUDIX
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QDT71436
UniProt:
A0A517TST7
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All DBs
Position
complement(738520..739626)
Genome browser
AA seq
368 aa
AA seq
DB search
MATDCTTQTLKDAKERQSFRRKLLAWFDKHKRDMPWRRTRDPYQIWLSEIMLQQTTVAMA
GPKFTAFVAAFPTVHALAAADEQQVLRLWEGLGYYRRARGLHAAAKVIVAEHDGQLPRDV
KSLMALPGVGRYTAGAVASFAYDVSAPIVETNTQRVLARLTGYRGEVVGGAGQRHIWEAA
ESLLPATGAGKFNLALMELGALVCKPSDPRCNECPVTAHCTAFAAGLQSEIPKLAAKVKV
TAVREATVVVRKSGRVLLRQRAKGERWEGMWDFPRFPLDGEGPLFVRRELVDKVRDQTGV
DIEPGGLLKTLKHGVTRYRITLDCYEARAAGGRVRSTDASPVRWTPLAELGDLPLSVTAR
KIATLIAG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggattgcaccacgcaaactctgaaagacgccaaagagcgccagtcgttccgg
cgcaagctgctcgcgtggttcgacaagcacaagcgcgacatgccctggcggcggacccgc
gatccgtatcagatctggcttagcgagatcatgctgcagcagacgaccgtcgcgatggcg
gggccgaagttcacggcgttcgtcgccgcatttcccaccgttcacgccttagcggccgcc
gacgagcagcaggtgctccgcctgtgggaaggcctcggctactatcgccgcgcccgcggc
ctccatgccgccgcgaaggtaattgtcgccgagcacgatggccagctgccgcgtgacgtg
aagtcactgatggcgctccccggcgtcggccgctacaccgccggcgccgtcgcctcattc
gcctatgacgtctcagcgccgatcgtcgagacgaacacgcaacgcgtcctcgctcgcctc
accggctatcggggcgaggtcgtcggcggggccgggcagcggcacatctgggaggccgcc
gaatcgctgctcccagccaccggcgccgggaagttcaacctcgcgctgatggagctcggc
gccctggtttgcaaaccctccgacccgcgttgcaacgagtgccccgtcaccgctcactgc
accgcattcgccgcgggcctgcagagcgagatccccaagctcgccgccaaagtcaaggtg
acggccgtgcgcgaggcgaccgtcgtcgtccgcaagtcgggccgcgtactgttgcggcag
cgagccaagggcgaacgctgggaagggatgtgggacttcccccgcttcccgctcgacggc
gaaggcccgctcttcgtccgcagagagctcgtcgacaaagtccgcgaccagaccggcgtc
gacattgaaccgggcgggttgctaaaaacgctcaagcacggcgtcacccgttaccggatc
acgctcgactgctacgaagcccgcgccgccggcggccgcgtccgctcgaccgacgcgagc
ccggtgcgctggacgccgctggccgaactgggcgatctgccgctgagcgtaacggcgcgg
aagatcgccacgctcatcgcgggctga
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