Lacipirellula limnantheis: I41_08140
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Entry
I41_08140 CDS
T09857
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
llh
Lacipirellula limnantheis
Pathway
llh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I41_08140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llh03021
]
I41_08140
Transcription machinery [BR:
llh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I41_08140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ECF
Sigma70_r4_2
HTH_23
HTH_29
DUF1670
HTH_28
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QDT71654
UniProt:
A0A517TTF9
LinkDB
All DBs
Position
1016728..1017357
Genome browser
AA seq
209 aa
AA seq
DB search
MNPEAPDPLSVTGRTDHSLLRRIRGGEQDAATALYVRYAQRLQALAKAKTSPALAARIDP
EDVVQSVFRTFFRRASEGHYDVPEGDELWKLFLVISLNKIRTLAGFHRAAKRDVSSTVGL
EHSEPALAAHTGSQEEALRTLEMIIDETLGDLPEAQREMIRLRIEGHGVTEIADTTRRSK
RSVERVLQQFRNRLGRLVLEEQGDDAAHS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagcacctgacccactgagcgtgaccggacgaactgaccattcgctgttg
cgtcgtatccgcggcggcgagcaggacgccgcgactgcgctatacgtgcggtatgcgcag
cgattgcaggcgttggcaaaagccaagacgtcgccggcactggctgcgcggatcgaccct
gaagacgtcgttcagtcggtcttccgcacatttttccggcgagcatcggaaggacattac
gacgtcccggaaggcgacgaattgtggaagctgtttctcgtcatctccttgaacaaaatt
cgtaccctcgctggattccatcgagcggccaagcgagacgtgtcgtcgactgtgggactc
gaacattccgagcccgcgctcgccgcgcacactgggagtcaggaagaggcattgcggacg
ctcgaaatgatcatcgacgaaacgcttggcgacttacccgaagctcagcgcgaaatgatc
cgtctgcggatcgagggtcacggcgttacggaaatcgccgatacgacgcgacgctcaaag
cgatcggtggaaagagtgctgcaacaatttcgaaatcggttgggacgcctcgtgctcgag
gaacagggtgacgatgccgcgcacagttga
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integrated database retrieval system