KEGG   Lacipirellula limnantheis: I41_08140
Entry
I41_08140         CDS       T09857                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
llh  Lacipirellula limnantheis
Pathway
llh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:llh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    I41_08140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llh03021]
    I41_08140
Transcription machinery [BR:llh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     I41_08140
SSDB
Motif
Pfam: Sigma70_ECF Sigma70_r4_2 HTH_23 HTH_29 DUF1670 HTH_28 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QDT71654
UniProt: A0A517TTF9
LinkDB
Position
1016728..1017357
AA seq 209 aa
MNPEAPDPLSVTGRTDHSLLRRIRGGEQDAATALYVRYAQRLQALAKAKTSPALAARIDP
EDVVQSVFRTFFRRASEGHYDVPEGDELWKLFLVISLNKIRTLAGFHRAAKRDVSSTVGL
EHSEPALAAHTGSQEEALRTLEMIIDETLGDLPEAQREMIRLRIEGHGVTEIADTTRRSK
RSVERVLQQFRNRLGRLVLEEQGDDAAHS
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaacccagaagcacctgacccactgagcgtgaccggacgaactgaccattcgctgttg
cgtcgtatccgcggcggcgagcaggacgccgcgactgcgctatacgtgcggtatgcgcag
cgattgcaggcgttggcaaaagccaagacgtcgccggcactggctgcgcggatcgaccct
gaagacgtcgttcagtcggtcttccgcacatttttccggcgagcatcggaaggacattac
gacgtcccggaaggcgacgaattgtggaagctgtttctcgtcatctccttgaacaaaatt
cgtaccctcgctggattccatcgagcggccaagcgagacgtgtcgtcgactgtgggactc
gaacattccgagcccgcgctcgccgcgcacactgggagtcaggaagaggcattgcggacg
ctcgaaatgatcatcgacgaaacgcttggcgacttacccgaagctcagcgcgaaatgatc
cgtctgcggatcgagggtcacggcgttacggaaatcgccgatacgacgcgacgctcaaag
cgatcggtggaaagagtgctgcaacaatttcgaaatcggttgggacgcctcgtgctcgag
gaacagggtgacgatgccgcgcacagttga

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