Lacipirellula limnantheis: I41_09900
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Entry
I41_09900 CDS
T09857
Symbol
barA
Name
(GenBank) Signal transduction histidine-protein kinase BarA
Organism
llh
Lacipirellula limnantheis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
Pkinase
HisKA
AAA_16
PK_Tyr_Ser-Thr
GAF
GAF_2
TPR_12
TPR_2
AAA_35
AAA_22
HATPase_c_3
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
QDT71829
UniProt:
A0A517TTY6
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All DBs
Position
1241541..1247429
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AA seq
1962 aa
AA seq
DB search
MAKRFALGRCLGHRQGADIHMALDAESSDTVVLKSVPAEGFTPGALMRLEYEASLLLQLQ
SEWLSPLVDFGRDGAQIYVAWKYFPGVPLEIRLRDGALRLDETIVVARSLLSALRDLHAC
QVLHRSVRPANLILDPRDSLTRAILVDFGPTRAIEPDAPLNRQPLDVALYASPEQAGSID
HDVTAASDLYSAGVVLFHCLTGRPPFQGSSVGAILFEHMTLPVPPMSVPGEGRGSVPRAL
EELVERLLRKDPRDRYQAAEAALADLEAIAEALAQGETDPSIVIGASDKRITLTEPAFVA
RAQQVATLDLQVERAIAGRGTVARVEGESGAGKSRLLAETLRRAARRGCWVLRGQGTSEV
AQRPFNLLDGIVDGYLAAIQARPELAAHVREQLGGYCSAVAAALPALAPSLQIENAVHSA
PEETGEARTIQALANFLDALGSADCPALILLDDCQWADELTYKLIRRWNTDGEIHAETRR
HVLLVVAFRAEEVAEDHLLRKFSAGADLKLPPLSHDEVRQLIESMAGALPEEAVDAVTRL
AEGSPFMASAVLRGLVECGALTPGGDGWVVDAEAMADAGSSSRAASFLTRRLDLLPPETI
EFLSAGAVLGKQFELEMAAELSEMTPADAITALNEARQRQLVWIRPDGAQCVYIHDKIRT
ALLERLPTAQRQQRHERAARYLLAHSPERFSDLAYHFDAAGDAAAALPYALLAADQARSQ
YALEVAEQQYRIALRGAQSDGARFNIVEGLGEVLMLRGRYAQAGEFFESAAALANNGLAR
AKIRSKLGELSFKRGDMGAAIADFEQSLRLLGRYVPRKSWITCLLLVWEGAVQALHTLFP
GLFLHRIKRQPDDAERLSLRQLSNLAHGYWYSRNMKMVLWAHLRNINLGERLLPSSELAQ
AYSEHAPAMTLVGFFSRGVTYAQKSLDLRKELGDLWGQGQSLVFYGITLFAASRFDECIE
KCRMAIRILERMGDYWQIHMARYQIAGSLYYLGDLRGAVHEAQLNHKSGLETGDEQASGI
ILDVWSRASSGAVPRHVIEPELTRPRTDAQGTCELLLAEGVCRLAADNVQGAVEAFEQAV
FVAADVGVKNAYTLPALAWAATSHRVLAENLREHTPRRRVDVLQKGARYARRAIRARFLC
SNDLPQALREYAMILAMQGRLRKSRNVFAWAIRAATRLKERQELAKSLLAAGEIGREAGW
SEAAHQIKQGEALLAELAASGDALEADAKGDRETVNLSLVDRFDNVLDSGRKIASGLAAE
TIHEAARSAALRLLRGERCFVIPLDPVDQTGDLAGVPTTHAAACQRAIDRALRARRALAL
VDDANDSSAAEGGERSVLCVPIYVRGRAVACLYVTHEQVRGLFGPDEERLADFVATIAGA
ALENAEGFAELQQLNASLEQRVAERTAAAAESRARELAISNNELERTANELRQAEEELRS
AKLAAESANQAKSRFLATMSHEIRTPMNGVLGMTELVLHTPLSEQQRNYVGVVKDSANAL
LTLLNDILDLSKIEAGRMELESIPLNLRETVSEATRLLGVAATGKGLELLCRVVPDVPQN
LLGDPSRLRQIVVNLVSNAVKFTAEGEVCVDVSLAARDGDRAVIRLAVQDTGIGIAKDKI
DAVFEAFRQSDSSTTRRYGGTGLGLSISMQLVQLMEGRIWLESEINVGSTFHCEIPFLLD
GEAVAEQSEQATKPTRAWLIGGNAHAATVYAEMLAQCNVEPTIINSADELPAGSPRLAVI
DLAAAGQIQWIAAEQLAGLPASIRPAMIMLIPAGQVDAAERCRNLGISQVLIKPAKLSEL
RAAVRSALGAGDQGPASAATPASLAEQRPLRILVADDSPVNQEVARGLLELCGHQVTLAD
DGRQAVELFGQHEFDLVLMDIEMPELDGLAAARRVRELEAERDVERTPIIALSAHALVGF
SAECQEAGMDGYLAKPIRPDELFALTRSLAAQPDAQAILMKS
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcgatttgcgctgggcagatgcttgggacatcgacaaggcgccgacattcac
atggcgttggatgccgaaagttccgacactgtcgtgctcaagtcggttccggcggagggg
ttcacgcccggcgcgctcatgcggctggagtacgaggcgtcgcttctgcttcaattgcaa
agcgaatggctatcgccgctcgtcgattttggtcgggacggcgcgcagatctatgtggcc
tggaagtattttcccggcgtgccccttgagatccggttgcgcgacggcgccctgcggctg
gatgaaacgatcgtcgttgcccgctcgctgctgtcggcccttcgcgacctgcatgcctgt
caggtgttgcaccggagcgtccgccccgccaacctcatcctcgatccgcgagactcccta
acgcgcgccatcctcgtcgacttcggcccgacgcgggcgatcgagcccgatgcgcctctc
aaccggcagccgctcgacgtggcgctttacgcgtcacccgaacaggcaggttcgattgat
cacgacgttaccgccgcgtccgacctttactcggccggcgtggtgctcttccattgcctc
actgggagaccgccctttcagggaagttcggtcggggcgattttgtttgagcacatgacg
ctgccggtgccgcccatgagcgtgcccggcgaggggcgaggcagcgtgccgcgcgcgctg
gaagagctcgtcgaacgcttgctgcgcaaagatccgcgcgaccgctatcaggcggccgaa
gcggcgctagccgacctggaggcgatcgccgaagcgctcgcccagggtgagacggatcca
agcatcgtcattggcgccagcgacaagcggatcacgctcaccgagccggcgttcgtcgcc
cgcgcgcagcaggtcgcgaccctcgacttacaagtggaacgcgcgatcgcggggcgggga
acggtcgcgcgcgtggaaggcgagtccggtgcgggaaagtcgcggctgctggccgagacg
ttacgccgcgcggcgcgtcgcggctgctgggtcttgcgcggccaggggacgagcgaggtt
gcacagcgccctttcaatctgctcgatggcatcgtcgatggctacctagccgccattcag
gcgcgacctgagctagcggcccacgtgcgagagcaacttggcggctattgcagcgccgtc
gccgccgcgcttcccgcgcttgcgccgtcgctgcagatcgagaatgccgttcactcagcg
ccagaagagaccggcgaagcccgcaccattcaagcgctagctaacttccttgacgcactc
gggtcagccgactgcccggcgctgatcctgctcgacgactgccagtgggcggacgaactg
acgtataaactgatccgtcgctggaacaccgacggtgaaattcatgccgagacgcgtcgg
catgtgctgttggtggtcgcctttcgcgctgaggaagtggccgaagatcatctcctgcgc
aagttttcagcgggcgccgacctgaagctcccgccgctcagtcacgacgaagtccggcaa
ctgatagagtcgatggctggggcgctccccgaggaggccgtcgacgccgtgacccggctg
gccgagggtagtccgtttatggcctcagccgtcttgcgcggcctggtggagtgcggcgcg
ctgacgcctgggggcgatggctgggtggtcgacgccgaggcgatggctgacgccggttcg
tcaagccgggccgcatcgtttttgactcgccggctcgatttgttgccgccagagaccatc
gagttcctgtccgccggcgccgtcttgggcaagcagtttgaactcgagatggccgccgag
ctgagcgaaatgacgcctgccgacgccatcacggcgctcaatgaagcgcggcagcgtcaa
ctggtgtggattcgccccgacggcgcgcaatgcgtctacatccacgataagattcgcacg
gccttgctggagcgactgccaaccgcgcaacgccaacagcgacacgagcgggctgcccgc
tacctgctagcgcattcgccagagcgattctcggacttggcgtaccactttgacgccgcc
ggcgatgcggctgccgcgctgccttacgcgctgctcgccgcggatcaggctcggtcgcag
tacgccctcgaagttgccgagcagcaatatcgcatcgctcttcgaggcgcgcagagcgac
ggcgcccgctttaatatcgtcgaaggacttggcgaggtgctgatgctgcgcgggcgctat
gcgcaggcgggtgaattcttcgagtcggccgcggcgctcgcgaacaacggtctcgcgcgg
gccaagattcgcagcaaactgggcgagctgtcattcaagcgcggcgatatgggggccgcc
atcgccgacttcgaacagtcgctgcggttgcttggccggtatgttccgcgaaaaagctgg
attacgtgcttgctgctcgtctgggaaggggcggtgcaggcgctccacaccttatttcca
gggctgtttctccatcggatcaagcggcaaccggacgatgccgagcgcctctcgttacgc
caattgagcaacctggcccacggctattggtactcgcgcaacatgaagatggtcctctgg
gctcatctgcgcaatatcaacctgggcgagcggctgctgccgagcagcgaactggcccag
gcctactcggaacatgccccagccatgacgctggtcggcttctttagtcgcggcgtgacg
tacgcgcagaaatcgctcgacctgcgcaaggagcttggcgacctctggggccaggggcag
tcgctggtgttctacggcattacattgttcgccgcgtcgcgtttcgacgagtgcatcgaa
aaatgtcggatggcgatccgcattctcgaacgcatgggcgactactggcaaatccacatg
gcccgctaccagattgccggttcgctgtactatctaggcgatttgcggggagccgtgcac
gaagcgcaactcaaccataagtcggggctggagaccggcgacgaacaggcgtcgggcatt
attctcgacgtctggagccgcgcctcctctggcgcggtcccgcggcatgtgatcgaacct
gaactgacgcgtccccggaccgacgctcaggggacttgcgaattactgcttgccgaagga
gtctgccggcttgctgccgacaacgtgcaaggcgcggtcgaagcattcgagcaagcggtg
ttcgtcgccgccgacgtcggcgtgaagaacgcgtacaccttgccggcgctggcttgggcg
gcgaccagtcaccgggtgctcgctgaaaacctacgcgagcacacgccgcggcgtcgcgtc
gacgtactgcaaaagggcgcccgctacgcccgccgagcgatccgcgcccgatttctttgc
agcaatgacctgccgcaagcattgcgcgagtacgcgatgatcttggcgatgcaaggacga
ttacggaagtcgcgcaacgtattcgcgtgggcgattcgcgcggcgacgaggctaaaggag
cggcaagaactggccaagtcgctgcttgcggcgggcgagatcggccgcgaggcgggttgg
tcggaagcagcgcaccagatcaaacaaggcgaggcgctgttggccgaactggcggcgtcc
ggtgacgccctggaggccgacgccaaaggagatcgcgaaacagtcaatctgtcgctggtc
gatcggttcgataacgtcctcgactccggtcgcaagattgcgtcggggctcgctgccgag
acgattcacgaggcggcgcgcagcgctgcactccggttgctacggggagagcgctgcttc
gttattccgctggaccctgtggatcagacgggcgaccttgcgggcgtgccgaccacccac
gctgctgcctgccagcgagccattgaccgcgccttgcgggcgcggcgcgcgttggcgctt
gtcgacgacgcgaatgacagctcggccgccgaagggggtgaacggtcggtgctctgcgta
ccgatttacgtccgcggccgcgccgtggcgtgcttgtacgtgacgcacgaacaggtccgc
ggcctttttggtcctgacgaagagcggttggccgatttcgttgccacgattgccggcgcc
gccctggaaaacgccgaaggcttcgctgaattgcaacaactcaatgcaagcctggagcaa
cgcgtcgcggaacggaccgccgccgccgccgaatcgcgcgcccgcgagttggcgatctcc
aacaacgaactggaacggaccgccaatgagctgcggcaggccgaagaagagctgcgcagc
gcgaaacttgccgctgaatcggccaatcaagcgaagagccgcttcctcgccacgatgagc
cacgagattcgcacgcccatgaatggcgtgctgggcatgacggagttggtgcttcacact
ccgctcagcgaacagcagcgcaattacgttggcgtcgtgaaggactcggcaaatgcgctg
ctcacgctgctgaacgacatcctcgatctgtcaaagattgaagcaggccggatggagcta
gagagcatcccgcttaacctgcgtgaaacagtctccgaagcgacgcgcttgctgggcgtg
gccgcgacgggcaaagggcttgaactgctctgccgcgtcgtgcccgacgttccccagaat
ctgctgggcgacccgagccgcctgaggcagatcgtggtcaacctcgtcagcaacgccgtc
aagttcaccgcggaaggcgaggtctgcgttgacgtgtcgcttgctgctcgcgacggcgat
cgcgcggtcatccgcttggcggtgcaggatacgggcattgggattgcgaaggataagatt
gacgccgtcttcgaggcatttcgccagtcggatagctcgacgacgcgccgttacggcggg
acgggcttagggctatcgatttcgatgcaactagtgcaattgatggagggccggatctgg
ctggagagcgagatcaacgtcggcagcacgttccattgcgagattcccttcctgctcgat
ggcgaggccgttgcggagcaatcggagcaggcgacaaagccgacgcgcgcctggctgatc
ggcggcaacgctcatgccgctactgtgtacgcagagatgctcgcgcagtgcaacgtcgaa
ccgacgatcatcaactccgccgatgagcttcctgccggatcgccccggttggccgtgatc
gacctcgcggcggcgggacaaatccaatggattgccgcggaacaacttgcggggctacca
gccagcattcgaccggcaatgatcatgctgatccctgccggtcaagtcgacgccgcggaa
cgctgccgcaacctcggcatctctcaggtcttgatcaagccagccaagctttcagaactg
cgcgcggccgtgcgctcggcgctcggcgccggcgaccaagggccagcatcggcggcgact
cctgccagcttagccgaacaacgaccgttgcgcatcctggtggccgacgatagtcccgtg
aaccaagaagtcgcgcgcggattgctggagctgtgcggccatcaggtgacgttggccgac
gatgggcgacaggcagttgaactatttgggcagcacgagtttgatctcgtgttaatggac
atcgagatgccggaactcgatgggctggccgcggcgcgtcgggtgcgagagctcgaagct
gaacgcgacgtcgagcggacgcccatcattgcgctatcagcgcatgccctcgtcggcttc
tcggccgaatgccaggaagcaggcatggacggctaccttgccaagccgattcgtcccgac
gagctcttcgcgctcacgcgctctctggccgcacagcctgacgcacaggcgatcttgatg
aaatcttga
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