KEGG   Lacipirellula limnantheis: I41_11920
Entry
I41_11920         CDS       T09857                                 
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
llh  Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:llh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:llh03400]
    I41_11920 (recQ_2)
Enzymes [BR:llh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I41_11920 (recQ_2)
    5.6.2.6  RNA 3'-5' helicase
     I41_11920 (recQ_2)
DNA repair and recombination proteins [BR:llh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    I41_11920 (recQ_2)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr DEAD Helicase_C DUF7384 DUF6406
Other DBs
NCBI-ProteinID: QDT72027
UniProt: A0A517TUI3
LinkDB
Position
complement(1492398..1496924)
AA seq 1508 aa
MLAAGKSALLLAPTGSGKTLAAFLAAIDRLMFHPLPGPSAVGALAPKRPKARVSRKGPAI
QESPSVGVRILYISPLKALAVDVDRNLRTPLVGIQAVAERHGHEFIAPKVAVRSGDTSAA
DRRDIVRHPPEILITTPESLYLLLTSKSRDILCNVETVIIDEIHAVAATKRGVHLFLSLE
RLERLRGAQDAQRAPLQRIGLSATQRPLEEIARLLGGAEADAKADVPVRPRAVEIIDASE
PKQLDLRIETPAEDMARLSQPLEIQTGPASAGPSYASIWPTIHPRLVELIRSHRSTMVFV
NSRRLAERLAAAINELAEEEIAQAHHGSIARAKRVEIEDRLKRGDLPAIIATSSMELGVD
MGAVDLVIQIEAPPSVASGMQRIGRAGHSVGAPSSGVIFPKYRGDLLACSAATQRMIRGD
VESTRYPRNPLDVLAQQIVAMVAMDPISVDELYAAVRGAAPFHDLPRSSFDGVLDMLSGR
YPSDEFSELRPRITWDRLSGQLTPRKSSQRLAVLNGGTIPDRGLYGVYLAGDVGGNGTRV
GELDEEMVFETHAGDVFLLGASSWRVLEITRDRVLVAPAPGEPGKMPFWRGDGPGRPLDF
GRAIGELSRQLVRSPHDEAVTLLQDSCRLDGQATDNLLRYVEDQREATAELPSDHCIVVE
SFLDELGDWRTCILSPFGSRVHAPWAMTVASRLRAETGLEVDFMWSDDGMVFRLPECEQA
PRFEMLFPASGEVEDQLVRELGSTAMFAARFRENAARALLLPRRQPNRRTPLWMQRRKSA
DLLAVASRYERFPIMLETYRECLRDVFDVPGLKQILTDIERQSIRVHQVESPTPSPFASS
LMFNYTANFLYQGDAPLAERRAAALALDHAQLRELLGTTDYRELLDPEAIDSLLLELQRL
DQRFTTGPDGVHDLLLHLGDLNEEEVAARCPEDAVALGQLERWLSELTATRRIVRVRIAG
ERRYIAAEEAARYRDALGVALPPGLPEAFLETGDDPLGNLVARYARTHGPFRAVEAAARL
GLGEAAISPALEALLQRNRLVLGEFLPGGTGREWCDAGVLRRLKSKSLARLRKQIEPAPP
EALARFLPSWQGIERPRQGLDGLLDVVEQLQGAPLLASDLEEMILPSRLADYLSGDLDEL
TTAGEVVWRGIESVGPNDGRIALYLAHALPLLAPGPAALDAPLAARVRELLATKGAIFFD
DIAAALDEFRNDVLEALWQLVWNGEVTNDALAPLRSLRGAAASATHSTSRSRGRRRGRRA
FRSRRLARLPGSEGRWSLINYGDEGQRTLTQRQTAITEQLLRRYGVLVRPAITRELVDGG
FAALYPILRAMEETGRIRRGYFVAGMGGAQFASAGSDELLRRAPAIVEAHVDNVIVLAAS
DPANAYGSIVKWPPTQVDSLQPQRGGGARVFLLDGKLIGYLGRAGNHLLTFAPEDPSDAA
MWHEKLVRSLANLGKRGVPVMIAQIDGEAAGLSPLAKVFARHGFSPTSHGYLHRGPDHHA
FEGAAAHA
NT seq 4527 nt   +upstreamnt  +downstreamnt
gtgctagccgcgggcaagagcgccctgttgctggcgccgacgggttcgggcaaaacgctg
gcggcgtttttggcggcgatcgaccggttgatgtttcatccgttgcccggcccgtcggcg
gtcggcgcgttagcgccaaaacgaccgaaggcgcgcgtctccaggaagggtccggcgatt
caggaatcgccgtccgtaggagttcgcatcctctacatctcgccgctgaaagcgctggcg
gtggacgttgaccgcaatctccgcacgccgctcgtgggtatccaggcggtcgccgaacgt
catggccacgagtttatcgcccccaaggtcgccgtccgctccggcgatacttccgcggcc
gaccgccgcgacatcgtccgtcatccgccggagattttgatcacaacgccggagtcgctg
tatctcctcctcacgtcgaagtcgcgcgacattctctgcaacgtcgaaaccgtcatcatt
gacgaaatccacgccgtggccgccaccaagcgcggcgttcatctcttcctcagcctggag
cggctggagcgtctgcggggcgcacaagatgcccagcgagcgccgctgcagcgcatcggc
ctctcagcgacgcaacggccgctcgaagaaatcgcccgcctgctcggcggcgccgaggcc
gacgccaaggccgacgttccggtacggccccgcgccgtggaaatcatcgacgccagcgag
ccaaagcagctcgacctgcgcatcgagaccccggctgaggacatggcgcggctgagccaa
ccgctggagatccagacaggccccgcctcggccggaccgtcgtacgcgtcgatctggccg
accatccatccgcggttggtggaattgatccgcagccatcgctccaccatggtcttcgtc
aacagccgtcgcctggccgaacggctagccgcagcaattaacgagttggccgaggaggaa
atcgcccaggcccatcatggttcgatcgcacgggcgaagcgcgtcgagatcgaagaccgc
ctgaagcgcggcgacttgccggcaatcatcgccacgtcgtcgatggagctcggcgtcgac
atgggcgccgtcgacctggtcatccagatcgaggccccgccatcagtcgcgtcgggcatg
cagcgcatcgggcgcgccggccatagcgtcggcgccccgtcgagcggcgtcatcttcccc
aaataccgcggggacctgctcgcctgcagcgccgcgacgcagcggatgattcggggcgac
gtcgaatcgacccgctacccgcgcaacccgctcgacgttctggcccaacagatcgtcgcc
atggtcgcgatggatccgatttcggtcgatgagctctacgccgccgtccgcggcgcggcg
ccgttccacgacctgccgcgctcgtcattcgacggcgttctggacatgctctcggggcgt
tacccgtcggacgaattctccgaactgcggccacgcatcacctgggaccgcttgagcggc
caactgacgccccgtaaatcgtcccaacggctcgccgtcctgaacggcggcacgattccc
gaccgcggtttgtacggcgtctatctcgccggcgacgtcggcggcaacgggacgcgcgtc
ggcgagctcgacgaagagatggtttttgagacgcacgccggcgacgtgttcctgctgggc
gcctcgtcgtggcgggtgctggagatcacccgcgaccgcgtcttggtcgccccggccccc
ggcgaaccaggcaagatgcctttctggcgcggcgatggccccgggcggccgctcgacttc
ggccgcgcgatcggcgagctctcgcgtcagcttgtgcgctcgccgcacgacgaagcggtg
acgctgcttcaagactcttgccgtctcgacggccaagcaaccgacaacctgctgcgctat
gtcgaagaccagcgcgaagcgaccgccgagctccccagcgatcactgcattgtcgtcgaa
tcgtttctcgatgaactcggcgactggcgaacgtgtattctctcgcctttcggcagccgc
gttcacgccccctgggcaatgactgtcgccagccgcctgcgcgccgagacgggtctcgag
gtcgatttcatgtggtctgacgacggcatggtgtttcgactgccggaatgcgagcaggcg
ccccgcttcgagatgctcttccccgcctccggcgaagtcgaagaccaactcgtccgcgaa
ctcggctccacggccatgttcgccgcccgctttcgggagaacgccgctcgtgcgctgctc
ctgccgcgccgtcagccgaatcgccgcacgcccctttggatgcagcggcgcaagtcggcc
gatctgctggcggtcgcgtcgcgttacgagcgcttccccatcatgcttgaaacgtatcgc
gaatgcctgcgcgacgtctttgacgtgccgggactgaagcagatcctcacggacattgag
cggcagtcgattcgagtccatcaggtcgaatcgccgactccctcgccgtttgcctcgtcg
ttgatgttcaactacacggccaacttcctctaccagggcgatgcacccctcgctgagcgt
cgcgccgcggcgctcgcgctcgaccacgcccaactgcgcgaactgctcggcacgaccgac
tatcgcgaactgcttgaccccgaggcgatcgactccttgctgttggagctgcagcgtctc
gaccagcgattcacgaccggcccggatggcgtccacgatctgctgctgcatttgggcgat
ctcaatgaggaggaagtggcggcccgctgtcccgaagatgccgtcgcgctgggtcagctc
gagcgctggctctccgagctcacggccacccgccgcatcgtgcgcgtacgcatcgcgggc
gagcgacgctacatcgccgccgaagaagccgctcgctatcgcgacgcccttggcgtcgcg
ctgccgcccgggcttccggaggcctttttggaaacgggcgacgatccgctcggcaatctc
gtcgctcgctatgcgcggacgcatggccccttccgcgcggtggaggcggccgcacgactc
ggcctgggagaggcggcaatctctccggcactggaggcgttgctgcagcgcaatcgtctc
gtgctcggcgagttcttaccgggcggcacgggtcgcgaatggtgcgacgccggcgtgctg
cgccggctgaagtcgaaatcgctggcccgcctccgcaaacaaatcgaacccgctccgccc
gaggccctcgcacgcttcctcccgagctggcaaggaatcgagcggccgcgacagggactc
gacggactgctcgacgtcgttgaacagctgcagggagctcccctgttggcgtccgacctc
gaagagatgattttgccgtcgcggctcgccgactacctttcgggcgatttggatgagctg
accaccgccggcgaagtcgtgtggcgcggcatcgaaagcgtgggcccgaacgacggccgc
attgccctctacctcgcccacgccctgccgttgctcgcgccggggcccgcagcgctcgac
gcgccgctcgccgcgcgcgttcgcgagctcctcgcgacgaaaggcgccattttctttgac
gatatcgcggccgcgctcgacgagtttcgcaacgacgtgctcgaagcgctgtggcagctt
gtctggaacggcgaagtcacgaacgacgccctcgccccgctacggtcgctccgcggcgcc
gcggcctcggcaacgcactccacatcgcgctcgcgcggccgacgtcgcggtcgacgtgca
tttcgctcgcgccgactcgcgcgccttcccggcagtgagggacgttggtcgctcatcaat
tatggggacgaaggtcagcggacgctcacgcaacggcaaaccgcgatcacggaacaactc
ctgcgccgctacggcgtgctcgtgcgtcccgccatcactcgagagttagtcgacggcggc
tttgccgcgctttaccccatcctgcgagcgatggaagagacgggccgcattcgccgcggc
tacttcgtcgccggcatggggggagctcagttcgcttccgccggcagcgacgaactcctg
cgccgcgcgcccgccatcgtcgaagcgcatgtcgataacgtcatcgtgctcgcggcctcc
gatccggccaacgcctacggctcaatcgtcaaatggccgccgacccaggtcgacagcttg
cagccgcagcgcggcggcggcgctcgcgtctttctgctcgatggcaaactgattggctat
ctcggtcgcgcgggcaaccatttgctgacctttgcccctgaggatcccagcgacgccgcg
atgtggcacgaaaaactggtccgttcactcgcaaatttaggcaagcgcggcgtgccggtg
atgatcgcccagatcgacggcgaggcggccggcctttcgccactggcaaaagtcttcgct
cggcacgggttcagccccaccagccacggctaccttcaccgtggccccgaccaccatgcc
ttcgaaggagccgccgcgcatgcctga

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