Lacipirellula limnantheis: I41_12490
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Entry
I41_12490 CDS
T09857
Symbol
smc_3
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llh03036
]
I41_12490 (smc_3)
Chromosome and associated proteins [BR:
llh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
I41_12490 (smc_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
CCDC39
AAA_29
CALCOCO1
DUF724
DUF1664
MRPL52
AAA_13
APG6_N
ABC_tran
ERM_helical
BRE1
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QDT72083
UniProt:
A0A517TUM6
LinkDB
All DBs
Position
complement(1563633..1567262)
Genome browser
AA seq
1209 aa
AA seq
DB search
MLSALELNGFKSFAERTRFEFPAGITVVVGPNGSGKSNVVDAIKWVLGAQSVKALRGKEM
TDVIFSGSRSRRAANAAEASLIFDNRAGIFDHDAAEIQITRRVYRSGEGEYLINRQPCRL
RDIRDLLADVGMSNGAYSIIEQGKVDAVLQSSPKERRLIFEEAAGVSRFRVKREEAARRL
EKVQQNLLRLADIVEELESRLKTVRSQAGRAQKYSEVSKRLELLRTHVGLEDWRKLTARI
DALRGAAGADETDVSGLERELAECDARVAEVDRENDALQQSYRDLTAAESTVRERLAQCE
STRSSHLARIDELELETQRLGQQLLVLTTRAGDSQQLVAETAAELEISQQQFDSGASVIA
EQQQQLAAAEAALATAAQAAVQSQTELQQAERELAQVHNDEQLLEAKLQTAEGSLGRFDD
ELVPLAATRERHVAEQNRSAAELTTLTSELEQANQQYQRCQTELAADRAKVAALHKLVAD
LEGRLTGANERTVVLEELERRLEGLTSGAKEVLRQAQAAPEGPFRNVRGVVADLLHVDAD
SAPLIEIALGDRANYLVVTETKSLAAALAGEPGSWPGRTSFLRLDVPSPASAVDRIDLSD
EPGVMGRADTFVDAEEELQPMIRRLLGRHWLVDTLATAIRVANGPGRGLNFVTAAGEAVL
ADGTLTVGPRQSIAGLLSRRSELRALREQIEEMERAVADAQHDREQLERRIAAAEGGLQK
LAARQAAAAQAHSDARLQVASMSDKIEQLDARIASLANARAAAAGQLQELAAHRVGSAER
TTLLRQRIEQFSNAIQQATEQQVQLEAEVEKLRHALTEQRVQFARSEQRLDGLRRQMEQL
RRDHAERDSLLEETQLRATECQAQRVRLQQLVLDLAAESAELFARKEGFGLQLAELEQTR
SLRQGDRSAAVMAADAIREQLLARQRRLQGVQLELQQLVQQRSATAERLREDYSLDLATL
AAENRTVDAVADSVPADRAAIEAEIRDLKGRLQAVGPVNVEALAELEGLETRYATLAGQY
EDLQSAKARLEQIVQQINAESRELFTTSVNNIRTHFQEIFRGLFAGGEADIVLEDDASGD
VLEAGISIIARPPGKQPRNISLLSGGERTLTCVALLLAIFRSRPSPFCVLDEVDAALDEA
NIDRFVEVLKQFMQSTQFIVITHSKRTMTCSDVLYGVTMQESGVSKRVSVRFEDVSEDGH
IAPSALKAA
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgccctcgaactcaacggcttcaagagcttcgcggagcggacgcgattcgag
ttcccggccggcatcaccgtcgtcgtcggccccaacggctccggcaaatcgaacgtcgtc
gacgccatcaagtgggttctgggcgcccagagcgtcaaggcgctccgcggcaaggagatg
accgacgtcatcttcagcggctctcgctcccgccgcgctgccaacgccgccgaagcctcc
ctcatcttcgacaatcgcgccggcatcttcgaccatgatgccgccgagatccaaatcacc
cgtcgcgtctatcgcagcggcgaaggcgaatatctcatcaaccggcagccctgccgcttg
cgcgacatccgcgacctgctggcagacgtcggcatgtcgaacggcgcctacagcatcatc
gaacagggcaaggtcgacgcggtgctgcagtcgtcgcccaaagagcggcggctcatcttc
gaagaggcggccggcgtcagccgctttcgcgtcaaacgcgaagaggccgcgcgacgactt
gagaaagtccagcagaatctcctccgcctcgccgacatcgtcgaggagctcgaatctcga
ctcaagaccgttcgctcgcaggcgggccgcgcgcaaaagtattcggaagtctccaagcga
cttgagttgctgcgtacccacgtcggccttgaagactggcgaaagctcaccgcccgcatc
gacgctctccgcggcgccgccggcgccgacgaaaccgacgtttccggcctggaacgcgaa
ctcgccgagtgcgacgcacgcgtcgcggaagtcgaccgcgagaacgacgcgctgcagcag
agttaccgcgacctgaccgccgccgagtcgacggttcgcgagcggcttgcacagtgcgag
tcgacgcgcagcagccatctggcgcgcatcgacgagttggaactggaaacgcaacgattg
ggccagcagctgctcgtcctcaccacccgcgccggcgactcgcagcaattggtcgccgag
acggccgccgagctagagatctcgcagcagcagttcgacagcggggccagcgtcatcgct
gaacagcaacaacagctcgcggctgccgaggcggcgctggcgactgcggcgcaggcggcc
gtgcaatcgcagactgaactgcagcaagccgaacgcgagctcgcccaggttcacaacgac
gagcaacttctggaagcgaagttgcagaccgcggagggctcgctgggtcgcttcgacgac
gagctcgtcccgctcgccgcgacccgcgagcgtcatgtcgccgaacaaaaccggtccgcc
gccgagctgaccacgctgacctccgaattggagcaagcgaatcagcaatatcaacgctgc
cagaccgaactcgccgccgaccgcgccaaagtggcggcgctccacaagctggtggccgac
ctcgaaggccgactcaccggcgctaatgaacgaaccgtcgttctcgaagagctcgaacgc
cgactcgaaggcctcacgtctggcgcgaaagaagttttgcgccaggcgcaggccgccccc
gaaggaccattccgcaacgtccgcggcgttgtcgccgacctgcttcacgtcgacgccgat
tcggccccgctgatcgagattgcgctcggcgaccgcgcaaattacttggtggtcaccgaa
accaaatcgctcgcggcggccctcgccggcgagcccggcagctggcccggccgcaccagc
tttctgcgactggacgttccctcgcccgcgagcgccgtcgaccgcatcgatctctcggac
gagcccggcgtcatgggccgtgccgacacgttcgtcgatgccgaggaagaattacagccg
atgatccggcggctgctgggacgccactggctcgtcgatacgctcgccacggcgatccgc
gtggcgaacggcccgggccgcggactcaattttgtcactgccgccggcgaagcggtgctg
gcggacggcacgctcaccgttggcccgcggcaaagcatcgccggcctcctgtcgcgacgg
agcgagttgcgcgcgctgcgcgagcagattgaagagatggaacgcgcggtggccgatgct
cagcacgatcgcgagcaactggagcgtcgtatcgccgcggccgaagggggactccagaag
ctggccgcccgccaagccgccgcggcgcaggcgcacagcgacgctcgcctccaagtcgcc
tcgatgagcgacaagattgaacaactggacgcccgcatcgcctcgctcgccaacgcccgc
gcagctgccgccggccaactgcaggagctggcggcacaccgcgtcggctccgcggagcga
accaccctgctccgccagcgaattgagcaattcagcaacgcgattcagcaggcaacagag
cagcaggttcagctcgaggccgaagtcgagaaactccgccacgccctcaccgaacagcgc
gtccagtttgcccgcagcgagcaacgtctcgacggcctgcgtcggcaaatggaacaatta
cgccgcgatcacgccgaacgcgattcgctcctggaggaaactcaactccgcgcaacagag
tgccaagcccaacgagttcgcttgcagcagttggtgctcgatctcgccgccgagagcgcc
gaattgttcgcccgcaaggaagggttcggcctccagctcgcggagttggaacagactcgc
agcctccgccagggcgatcgctccgccgcggtcatggccgcagatgcgattcgcgagcag
ctattggcccgccagcgccgcctgcagggcgtccagttggaactgcagcaactcgtccag
cagcgatcggcgacggccgaacgcctacgcgaagactacagtctcgatctggcgactctc
gccgccgagaatcgaactgtcgacgccgtcgccgattcggttccagccgaccgcgccgcc
atcgaagccgaaatccgcgacctgaagggtcgactgcaagcggtcggtccagtgaacgtc
gaggctctcgccgagctcgaaggcctggagacgcgttacgcgacgctggccggccagtac
gaggacctgcaatcggccaaggcgcggctcgaacaaattgtccagcagatcaacgctgaa
agccgggaactctttactacgtcggtcaacaacatccgcacgcacttccaggagattttc
cgcgggttgttcgccggcggcgaggccgacatcgtgctggaggacgatgccagcggcgac
gtgctcgaggctggcatctcgatcatcgcccgcccccccggcaagcaacctcgcaacatc
tcgctcctttcaggcggcgaacgcacgctgacctgcgtggcgctgttgctagcgatcttc
cgcagccgccccagccctttctgcgttctggacgaagtcgacgccgcgctcgacgaagcg
aacatcgatcgctttgtggaagtactgaagcagttcatgcagtcgacgcagttcatcgtc
atcacgcattccaaacgaacgatgacctgttccgacgtcctctacggcgtaacaatgcaa
gagtcaggcgtgtcgaagcgcgtctccgtgcgatttgaggacgtcagcgaagatggccac
atcgcgccgtcagcgctcaaagccgcgtag
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