KEGG   Lacipirellula limnantheis: I41_31700
Entry
I41_31700         CDS       T09857                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
llh  Lacipirellula limnantheis
Pathway
llh03030  DNA replication
llh03410  Base excision repair
llh03420  Nucleotide excision repair
llh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:llh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I41_31700 (polA)
   03410 Base excision repair
    I41_31700 (polA)
   03420 Nucleotide excision repair
    I41_31700 (polA)
   03440 Homologous recombination
    I41_31700 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llh03032]
    I41_31700 (polA)
   03400 DNA repair and recombination proteins [BR:llh03400]
    I41_31700 (polA)
Enzymes [BR:llh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I41_31700 (polA)
DNA replication proteins [BR:llh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     I41_31700 (polA)
DNA repair and recombination proteins [BR:llh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     I41_31700 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     I41_31700 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 baeRF_family2 HHH_5 HHH_2 GAF_3
Other DBs
NCBI-ProteinID: QDT73978
UniProt: A0A517U021
LinkDB
Position
3963106..3966024
AA seq 972 aa
MAKTARQTKFPGMDDAEPAPGAADGGAAATTPAGVGPDGIDRTAAREAAGADPSIRDWTV
YVVDSHSLIFQVFHAMAGSELTSPRGEPVSAVYGFTRDLVQLIERRQPTALICAFDLSGP
TFRHELYDFYKADRGEMPESLSAQMPKIREVVQAMGIPIVDYPGFEADDVLATVARMCDE
AGARCLLVTGDKDCRQLLTPQTAIYNIRKDQEYGATELYGDWGIAPEQVVDFQSLVGDKI
DNVPGVPLIGPKVAKELLEKYGTLENVLDHAAEVGGKRSQNLIEHREAALLSRKLVELDK
NVPIAIDWNSARIGGFDESRLTELFQDYGFRGLAERVMAVAGANVEKAPGQLIPAVSDWD
GDYQVVDTPEALAVLISQLEQQEQLSIDTETTDISPRNAEVVGYSFAWRPGQAFYVPVRG
PAGDRVLDPAATAAALKPIFENPAIAKIGQNIKYDLIVLRTLGINLRGITFDTMVADYLI
DSGERTHNLDHLAKKYLGHETIRISEIIGSGKNQLRMDQAPVARVGEYAAEDADVPLRLL
PILVDRLSADGLAELNETIEVPLIDVLADLEYLGVCVDVARLKELSVEYTERLHNIKVAI
EEMAGRPLNIDSPKQLAELLFNELKLPVLKKTKTGASTDASVLEELAPLHPLPAKIVEYR
QYSKLLGTYIDALPQLVSPATGRVHASLNQVVAATGRLSSSNPNLQNIPIRTREGREIRS
AFKAGEPGWVLLAADYSQIELRVLAHYSADPRLREAFENDEDVHRLVASQVNGVAMDEVT
SEMRRGAKAVNFGIIYGQSPFGLAKGLGISKEEAAEFIEKYFATYPGVMEYLIDTLTLCR
EQGYVTTLFNRRRAIDGVRPVPPGLREKSGTLRYLNVPERTAVNAVIQGTAADLIKLAMI
RIQERLRRERLPGRMLLQIHDELLFETPPDDAAELAKLVRQEMSTVAELAVPLKVDVKIG
PNWAECEAWDEE
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggccaaaactgctcgccagacgaaattccctgggatggacgacgccgagccggcgccc
ggcgctgccgacggcggcgcggcggcaacgacgcccgcgggcgtcggtcccgatgggatc
gaccgcacggcggcacgcgaagcggccggagccgacccgtccatccgtgactggaccgtc
tacgtcgtcgattcccattcgctgatcttccaggtctttcacgcgatggcggggtcggag
ctcaccagcccccgcggagagccggtcagcgcggtctatgggttcacgcgcgatctggtg
cagctgatcgaacgccggcagccgacggcgctaatttgcgcgttcgacctctccggcccg
acgttccgccatgagctctatgacttctacaaggccgatcgaggcgagatgcccgaatcg
ctctcggcgcagatgccgaaaatccgcgaagtcgtccaggcgatgggaatcccgatcgtc
gactatcctggttttgaagctgatgacgtgctggccaccgtcgctcgcatgtgcgatgag
gccggcgcccgctgcctgctggttaccggcgacaaggattgccggcagctcctcacgccg
cagactgccatctacaacatccgtaaggatcaggagtacggagcgaccgaactctacggc
gattgggggatcgccccggaacaagtcgtcgattttcaatcactcgtgggcgacaagatc
gacaacgtccccggcgtcccgcttattgggccgaaggtcgccaaggagcttctcgaaaaa
tacggcacgctcgaaaacgtcctcgatcacgccgccgaagtgggcggcaagcggagtcag
aacctcatcgagcatcgcgaagcggcgctcctctcgcggaagctggtcgagctcgacaaa
aatgtgccgatcgccatcgactggaattcggcccgcatcggcggcttcgatgaatcgcga
ctgaccgagttgttccaagactacggtttccgcggcctcgccgagcgcgtgatggccgtg
gccggcgcgaatgtggaaaaggcgcccggccagctcatcccggcagtcagcgattgggat
ggcgactatcaggtcgtcgacaccccagaagcacttgccgtgctcatcagccagctggaa
cagcaggagcagctttcgatcgacaccgagacgaccgacatctccccacgcaacgccgag
gtcgtcggctattccttcgcgtggcgccccggtcaggcgttctacgttccagtacgcggc
ccagcgggagatcgcgtcctcgatccagccgccacggccgctgcgctcaagccgattttc
gagaatcccgccatcgccaagattggccagaacattaagtatgatctcatcgtgctgcgc
acgctcggcatcaatctccgcggcatcaccttcgacacgatggtagccgactacctgatc
gactccggtgagcgaacgcataatctcgatcacctggcgaagaagtatctgggacacgag
acgatccgcatcagcgaaatcatcggctccggcaagaaccaactgcgcatggatcaggcg
ccagtcgcccgcgtgggcgagtatgccgcggaagacgccgacgtgccgctgcggttgctc
ccgattctcgtcgatcgcctctcggccgacggactggccgagctcaacgagacgatcgaa
gtcccgctgatcgacgtgctggccgatctggagtatctcggcgtctgcgtcgacgtggcg
cgactcaaggaattgagcgtcgaatacaccgagcggctccacaatatcaaggttgccatc
gaagagatggcgggccgcccgctgaacatcgactcgccaaagcaactcgctgaattgctg
ttcaacgaactgaagctgccggtcctcaaaaagactaaaactggcgccagcaccgatgcc
agcgtgctggaggaactcgcgccgctccatccgctgccggcgaaaatcgtggagtatcgg
cagtactcaaagctgctgggcacgtacatcgacgccctcccgcaactcgtcagccccgcc
accggccgcgtacacgcctcgctgaaccaggtcgtcgcggccacgggacggctcagttcg
agcaaccccaatctgcaaaacatccccatccgaacgcgggagggtcgcgaaatccgctcg
gcgttcaaggcgggcgagccaggctgggtgctgcttgccgccgactactcgcaaatcgaa
ttgcgagtgctggcccattactcggccgacccccgacttcgcgaggcgttcgaaaacgac
gaggacgttcatcgactggtcgccagtcaggtgaacggcgtcgccatggacgaggtgacc
agcgagatgcgccgcggcgccaaggcggtcaacttcggcatcatctacggccaaagcccg
ttcggcttggcgaagggcctcggcatctccaaggaagaggccgcggaattcattgaaaag
tacttcgccacgtacccgggagtgatggagtacctcatcgacacgctgacgctctgccgc
gagcaagggtatgtgaccacgctgttcaatcgccgccgcgcaatcgacggcgtccgcccc
gtgccgccaggcctgcgcgagaaatcgggaacgctgcgttacctcaacgtccccgaacga
accgctgtgaacgccgtcatccaggggacggccgccgacctgatcaagctggccatgatc
cgcatccaggaacgcctgcggcgggaacgcctgccggggcggatgctgctccagatccac
gacgaactgctgttcgaaacgccgcccgacgacgccgccgaactggccaagcttgtccgc
caagaaatgtcgaccgtcgccgaactcgccgtgccgctcaaagtcgacgtcaaaatcggc
cccaactgggccgagtgcgaagcctgggacgaagaatga

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