Lacipirellula limnantheis: I41_33280
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Entry
I41_33280 CDS
T09857
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llh03400
]
I41_33280 (addA)
Enzymes [BR:
llh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I41_33280 (addA)
DNA repair and recombination proteins [BR:
llh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I41_33280 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QDT74133
UniProt:
A0A517U0J9
LinkDB
All DBs
Position
complement(4143377..4146937)
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AA seq
1186 aa
AA seq
DB search
MNPAVERPLTPQQRAALDARDVSVSLSAGAGCGKTFVLTERFLSHVDPTQVEPAHLEELV
AITFTDAAAREMRDRIRRRCFERLQSAQDDQEAAAWQRLMRSMDGARISTIHSFCTQLLR
SYAVEAGLDPQFEVLDAATAELMKLETVDDRLRALLLAGDEDVLNLAAKRGLDRVRTDVA
RLAGPLALPAVQRWQHATVDEVVAAWQQYFASEAAPAAIRELLGCAEANVLRRLARVDLV
VKATLGDHLLALADALQGRELTPADAHALLERLNQLARVSGVCTAKDWADPEDFAEFRDT
CAAFRDRIKKSILKKPFDVPAAREAAGQGLALLRLVGNVTQSLERTKTRRNQLEFDDLLA
RAHRLLTAPENDAIRREVAGSTRLLMVDEFQDTNPLQVAIIKAFCGDGWREQGLFAVGDF
KQSIYRFNGAEPRVSNELRNALLPTGRLSLTRNFRSQPAVTAFVNAVFHQAFEQYEPLVP
ARPQATPTPAIEFMWTPGENSSNDDRHEPAADSVDATGAALTLKRGRRAGAARDARVLEA
DWIARRLVQLLQSEARLVVDIAGDPAAPRPLKLGDIAILLRTLSDAQVYEEALRAHGLSY
YLAGGHAFYSQQEIYDVLNLFRAVASEVDEIALAGALRSPLFSLADETLYWLVQRHQSLN
AALAAISQPPAELDAVEAAKVRRAAATMARLREEKDRLLVADLFALAMELTGYDAVLLTE
FLGPRKAANIEKLIEQARTLDRSSPGDLPGFITQLSEFVSRAPKEALAATQSEGDVIRIM
TIHYSKGLEFPLVVLPDLDRQRHAGMTLPVLDETLGPLVSIDAEEKEGLIGIDLYRHAED
VLEIEERRRLLYVACTRAADYLLLSSSIDDPAQPKRDWLQLIDQQVNLVDGSLRQPLPAG
YEAPQILVTTARPQIDDEKSAQPRGADLETLVARTRQLAAKGASELPRGSDAIPADASAR
RRFSFSQLTGALALQAEVEDDSAGIAMPSGGASLEVEREARELGWLVHAVLEQWNFQRPP
ALAEFCESLAWLQPERPQEQTVARAVRLLEEFLASPRGRELASAQIVRREVEFLLPWPPV
DQPTTRYLHGYIDCLYQGADGRWRLLDFKTNRVTADNLGTVANQYESQLLVYALAVERAL
GAPPAEVALVLLDGGCEHRFNWSDADRTHAMRRIDAAMTRLVTDLT
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcccgccgtcgaacgacccctgactccgcagcagcgcgccgcgctcgacgcccgc
gacgtgagcgtctcgctatcggcgggcgccgggtgcggcaagacgttcgtgctgacggaa
cgcttcctgtcgcacgttgatccgacgcaagtcgaaccggcgcatcttgaggaactggta
gcgatcacctttacggatgccgccgcccgtgagatgcgcgaccgaatccgccgccgttgt
tttgaacgactgcagtcggcgcaagatgatcaggaggcggcggcatggcaacggctgatg
cgctcgatggatggcgcccgcatcagcaccatccactcgttctgtacgcagttgttgcgc
agttatgccgtcgaggccggactcgatccgcagttcgaagtgctcgacgccgccacggcg
gagctcatgaagctggagacggtcgatgaccggctccgcgccctcctgcttgcaggcgat
gaagacgtattgaatcttgctgccaagcgcgggctcgaccgcgtgcgcaccgacgtggct
cgcctggccggtcccctggcgcttcccgcggttcagcgctggcaacatgcgaccgtcgac
gaagtagtcgccgcctggcagcagtactttgcttcggaggcggcgcctgcggcgattcgg
gaacttcttggctgcgccgaagccaacgtcttgcggcgactcgcccgcgtcgacttggtc
gtcaaggcaacgttgggagaccatctacttgcactggcagacgcgctgcaaggccgtgag
ctgacgcccgcagacgcccatgcgttgctcgaacgtctcaaccaattggcgcgcgtgtcg
ggcgtctgcacggcgaaggactgggcggaccccgaggattttgccgagttccgagataca
tgcgccgcgtttcgcgatcgcatcaagaaaagcattttgaagaaaccgttcgacgtcccc
gcggctcgcgaggcggctggccagggactcgcgctgctccgcctcgtcggcaatgtgacg
cagtcgctcgaacgtacgaagacgcggcggaatcagctggagttcgacgaccttctcgcg
cgtgcgcatcgattgctcacggcgcccgagaatgacgctattcgccgagaggtcgccggc
agtacgcgattgctgatggttgacgagttccaggataccaatccgctgcaggttgcgatt
atcaaagccttctgcggcgacggctggcgcgagcagggactgttcgccgtgggggatttc
aagcagtccatctatcgcttcaacggcgccgaaccgcgggtgtcgaacgaactccgcaac
gcgcttttacccaccggacgcttgtcgctgacgcgcaatttccgcagccagccggccgtg
accgccttcgtcaacgcggtatttcaccaggccttcgagcaatatgagccgctcgtcccg
gcccgaccgcaggcgacgccgactcctgccattgagttcatgtggacgccgggcgagaac
tcttcgaatgacgatcgccacgagcccgcggccgactcagtcgacgccaccggcgccgcc
ttaacgctaaagcgaggacgccgcgctggggcggcgcgcgacgcccgcgtgttggaagcc
gattggatcgcccgacgactcgttcagctcttgcagtctgaagcacgcctggtcgtcgac
atagcgggcgatccggcggcgccgcggccgctaaagttgggcgatatcgcgattctgctg
cgaacgctcagtgatgcacaagtttacgaagaggcgctgcgcgcccacggcctgagctac
tacctcgctggcgggcacgcgttttactcgcaacaagagatttacgacgttctcaatctc
tttcgggccgttgccagcgaagtcgacgaaatcgccctggccggcgcgctccgcagcccg
cttttctcgctcgctgacgaaacgctctactggctcgtccagcggcatcagtcgctcaac
gcggcgctcgcagcgatcagccagccgcctgccgagttggatgccgtcgaggccgcgaag
gtccgccgcgccgccgcaacgatggcgagattgcgcgaggagaaggatcggctgctcgtg
gccgacttgttcgcgctcgcgatggaactaaccggctacgacgccgtcctgcttaccgaa
ttcctcggcccgcgcaaggcggccaatatcgaaaagttgatcgaacaggctcgcacgctg
gaccgcagttcgcccggcgacttgcccgggttcatcacgcagttgtcggaattcgtctca
cgcgcgcccaaggaagcgttggccgcgactcagtcagaaggcgacgtcattcgcatcatg
acgattcactattcaaaaggactcgagtttccgttggtcgttttgcccgacctcgaccga
cagcgccacgcgggcatgacgctcccggtgctcgatgaaaccctcggaccgctggtctcg
atcgatgctgaggagaaggagggccttatcgggatcgacctctatcgacatgccgaggat
gttctggaaatcgaagagcgccggcggctgctctacgtcgcgtgcacgcgcgcggcagat
tatttgctgctgagcagcagcatcgacgaccccgcgcagccaaaacgcgattggctgcaa
ctgatcgaccagcaggtgaatctcgtcgacggctcgctgcgacagccgctgccggccggc
tacgaagcgccgcagattctcgtgacgaccgcgcggccgcaaatcgatgatgaaaagagc
gcacagccgcggggagccgatctggagacgctcgtggccaggacgcgccagctcgcggcc
aagggcgcgagcgaactgccgcgcggcagcgacgcgattcctgccgatgcttcggcgcgg
cgaaggttttcgttttcgcagctgaccggggcgctcgcccttcaagccgaagtcgaggac
gactctgctggcatcgcaatgccttcgggtggagcatcgttggaggtcgagcgcgaagcg
cgagaactcggttggctcgtccatgccgttttggagcaatggaacttccaacgtccgccg
gcactcgccgagttctgtgaatcgctcgcctggctccagcctgagagaccgcaggaacag
accgttgcccgcgccgttcgcttgctggaggagtttctcgcctcgccccgcggccgagaa
ctggcgtccgcgcaaattgtgcgtcgagaggtcgagtttctgttgccttggccgcctgtc
gatcagccgacgacgcgttatctccacggctacatcgactgcctgtatcagggcgccgac
ggccgctggcgactcctggatttcaagacgaatcgagtcaccgcggacaatctcggcacg
gtcgcgaaccagtacgagtcgcaactgctcgtgtatgcgttggccgtggaacgcgccctc
ggcgctccgcccgccgaagtcgcgctcgtcctgctggacggcggctgcgaacatcgcttc
aattggagcgacgcagaccgcacgcacgccatgcgccggattgacgcggcgatgactcgc
ttggtcacggatctcacctaa
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