Lacipirellula limnantheis: I41_34880
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Entry
I41_34880 CDS
T09857
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
llh
Lacipirellula limnantheis
Pathway
llh02020
Two-component system
llh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I41_34880 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I41_34880 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llh03021
]
I41_34880 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
llh02035
]
I41_34880 (fliA)
Transcription machinery [BR:
llh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I41_34880 (fliA)
Bacterial motility proteins [BR:
llh02035
]
Flagellar system
Flagellar assembly proteins
Stator
I41_34880 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_23
DUF4143
GerE
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
QDT74293
UniProt:
A0A517U113
LinkDB
All DBs
Position
4345880..4346680
Genome browser
AA seq
266 aa
AA seq
DB search
MSTMMLTAKRCAPEDIADLWDQFKKDPSRKELRNALIENYLPLVKYNGERIWQRLPDGVE
LDDLISAGVFGLMDAINAFDMGRGVKFETYCVPRIRGAMLDELRSMDWVPRLVRSKASKL
NECLKTLEASLGRAPNENEIAEYMQISLQEVEKLIADANAVGLISLNKKWYETDSYKDVR
EIDILEDKKGEDPTRRIQKSDLMRLVTKGLNRNERLIIILYYYEEMTMKEIGATLDLSES
RVSQMHSAIVQRLQGQLGRRRPEFGT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatgatgctgaccgcgaagaggtgcgcccccgaggacatcgcggatctttgg
gatcaattcaagaaggatccgagccgcaaggaactgcgcaacgcgctgattgaaaactac
ctgccgctggtcaaatacaacggcgaacgcatctggcagcggctgcccgacggcgtcgag
ctcgacgacctcatctccgccggcgtcttcggcctgatggacgccatcaacgccttcgac
atgggccgcggcgtcaagttcgaaacctactgcgtccctcgcatccgcggcgccatgctc
gacgagctccgcagcatggactgggtgccgcggctcgtccgctcgaaagccagcaagctc
aacgagtgcctcaagacgctcgaagcctcgctgggccgtgccccgaatgagaacgagatt
gccgagtacatgcaaatctcgctgcaagaagtcgagaagctcatcgccgacgccaacgcg
gtcgggctgatcagcctcaacaagaagtggtacgagaccgacagctacaaagacgtccgc
gagatcgacattctcgaagacaagaagggcgaagacccgacccggcgcattcagaagtcc
gacctgatgcggctggtgaccaagggcctcaaccgcaatgagcgcctcatcatcatcctc
tactactacgaggaaatgacgatgaaggaaatcggcgccacgctcgacctcagcgaaagc
cgcgtcagccaaatgcacagcgcgattgtccagcgcctgcagggccaactcggccgccgc
cgcccggagtttgggacctga
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integrated database retrieval system
