Lacipirellula limnantheis: I41_37960
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Entry
I41_37960 CDS
T09857
Symbol
ykoV_2
Name
(GenBank) putative DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
llh
Lacipirellula limnantheis
Pathway
llh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I41_37960 (ykoV_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llh03400
]
I41_37960 (ykoV_2)
DNA repair and recombination proteins [BR:
llh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I41_37960 (ykoV_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QDT74599
UniProt:
A0A517U1U2
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All DBs
Position
complement(4663420..4664313)
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AA seq
297 aa
AA seq
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MPRPIWKGHISFGLVNVPVALFAAERRATQGFKLIDSRNSARVRYERVNEETGEEVPWDQ
IVKGYEFEEGQYVLLSQEELDNASAEMTKAIEIEQFVDREQIGIRFFDRPYLVAPAGKGE
KGYVLLREAIAGAGKAGLARVVIRARQYLAVLVVEGDALVLELLRYADELQSVEDLELPG
SNLSEYKVSKKEIELAAKLIEGMSGEWDPAQFKDEYRDALDRMIQKKIKSGQTEAITDVE
ADDAKTQPASVNFMEMLKRSVAGTSKPGPAKKRAVKPRAVARRASPRKRPVKKKQAG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcccgatctggaaaggccatatctccttcggcctcgtcaacgtcccggtcgct
ctgttcgcggcggaacgtcgagcgacccagggattcaagctgatcgacagtcgaaactcg
gcccgcgtccgatacgagcgcgtgaacgaggaaacgggagaggaggttccctgggatcag
atcgtcaaaggatacgaattcgaggaaggtcagtatgtgctcttaagtcaggaagaactc
gacaatgcttcggcggaaatgaccaaggcgattgagatcgaacagttcgtcgatcgtgag
caaatcggcatccgtttcttcgatcgcccctacctcgtcgcgccggccggtaagggggaa
aaaggctacgtcctcctgcgggaggcgatcgctggcgccggtaaggcgggattggcacgc
gtggtgatccgcgcgcggcaataccttgccgtgctggtcgtggagggggacgctttggtc
ctcgagttgctacgttatgccgacgaactgcaatcggtcgaagacctggaacttccaggc
agcaacctcagcgaatataaggtgtcgaaaaaagagatcgaacttgcggcaaaactgatc
gaaggcatgagcggcgagtgggatccggcacagttcaaggacgaataccgcgacgccctt
gatcggatgatccaaaagaaaatcaaatcagggcaaacggaggcgatcaccgacgtcgag
gctgatgacgccaagacgcagccggcgagcgttaattttatggagatgctcaaacggagc
gtcgccggaacgtcgaagccaggcccggcgaaaaagcgggccgtcaaaccccgcgcagtt
gcccgccgcgcatccccgcgcaaacgacccgtgaaaaagaagcaggcgggctga
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