Lacipirellula limnantheis: I41_39200
Help
Entry
I41_39200 CDS
T09857
Symbol
lagD
Name
(GenBank) Lactococcin-G-processing and transport ATP-binding protein LagD
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
llh
Lacipirellula limnantheis
Pathway
llh02010
ABC transporters
llh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I41_39200 (lagD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I41_39200 (lagD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llh01002
]
I41_39200 (lagD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llh02000
]
I41_39200 (lagD)
Peptidases and inhibitors [BR:
llh01002
]
Cysteine peptidases
Family C39
I41_39200 (lagD)
Transporters [BR:
llh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
I41_39200 (lagD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_30
AAA_21
AAA_23
DUF87
nSTAND3
NACHT
Sigma54_activat
DUF5906
nSTAND1
MobB
MMR_HSR1
DLIC
AAA_15
Dynamin_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QDT74721
UniProt:
A0A517U270
LinkDB
All DBs
Position
complement(4824224..4826464)
Genome browser
AA seq
746 aa
AA seq
DB search
MWGRKYRLVRQNDQADCGPAALATLARHHGLSVNLEYLRHLSHTDRDGASLFGLRQAAEL
LGFSAKAVRLPAESLATAPLPAIAHLTLADGAGHYVVLFRVARRSVVIGDPAGGIETLPM
EKFLQRWSGNLLLAVPDGVSKTNAHPRPASPIKQFLHLLTPHRALIGEVVLCALLMALLA
VSTSYFVQHLIDSVLVHSERTLLNACGVGMLLIVLLRTAFGAARQYLLAFMGRRIDLILI
GGYSRHILRLPVQFFHTRRVGEIFSRVGDADKLRDAISGATTTAIVDGTVVVALLTLLWC
YDLPLAAAATLIVPVFLGAIALNHSAIARHSRASMERGSLFAAHLVEDISGVETIKACDA
QSMRSDRTEAHLVSFIQSMFSLAKLDVWMTSLSTLISGLAGVAILWLGGHRVLTGAITIG
QLLFFYTLVITMLEPLGRLASVNLKIHEALSAVERLFQILDLEVEPIGYDQAPFTHIRRE
IQLQNVSFGYGSKHDVLEQVNLTIPSGKMVAIVGESGSGKSTLLKLLLRFHSPSAGQILV
DGVDLRDFALGSLRNRLGVVTQDAYVFTGSIRENISLGSPQATLTDVIAAAKAAGLDAFI
NTLPLRYDTMVGERGSNLSGGQRQRLAIARALVGHPEMLIFDEATSQLDTATERQIQENL
RKTLAGRTVLVVAHRLSTIMDADLIYVMQSGRVAECGSHGELLAAGGAYAKLWESQTTSL
DGLFHLPPALNGRALANRISHAFSEG
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagaaaataccgactagtgcggcagaacgaccaagcggactgcggcccggca
gcgctggcaaccttggctcgccatcacgggctgtccgtcaacttggaatacctccgtcat
ctcagccatacggatcgggacggcgccagcctgttcggcctgcgacaagcggctgagttg
cttgggttctccgcgaaggccgtgcggctgccggcggaatctttggccacggcgccgctg
ccagcgattgctcatctgacgctcgccgatggtgcggggcattacgtcgtgttgtttcgc
gtcgctcgccgctcagtcgtcatcggcgatccggccggcggaatcgaaacgttgcccatg
gagaagtttctccagcggtggagcggaaatctgctcctggcagttcccgacggtgtttcg
aagacgaacgcgcatccgcgacccgcgtccccgatcaagcagtttctacacttgctgacg
ccccaccgagctttgatcggcgaggtcgttctctgtgcgctcttgatggcactgctggcg
gtatcgacttcgtacttcgtccagcacctgatcgattcggtgctcgtccattcggagcga
acgctgctgaatgcctgcggcgtcgggatgttgttgatcgtgttactgcgtacggcgttt
ggagccgctcggcagtacctccttgcgtttatgggaagacgcatcgatctcatcttgatc
ggcggttactcacgccacatcctgcggttacccgtgcagttctttcatacccgtcgcgtc
ggcgagattttttctcgggtcggcgacgccgacaagcttcgcgacgccatcagcggcgcc
acgaccaccgccatcgtggacggaacagtcgtcgtcgccttgctgacgctcctctggtgt
tacgatttgccgttggcggccgcggccacgctgatcgtgcccgtctttctgggcgccatc
gctctcaaccattccgcgattgcccgacactcaagagcgtcaatggagaggggatcgctg
ttcgcggcacacctggtcgaggacatttcgggagtcgaaaccatcaaggcctgcgacgct
caaagcatgcgcagcgatcgaaccgaagcccacttggtaagttttatccagtcgatgttc
tcgctggcgaagctcgacgtctggatgacgtcgctcagtacgctcatcagcggcttggca
ggcgtggccatcttgtggctgggcggacatcgcgtcctgactggcgccatcacgatcggc
cagcttctgttcttttacacgctagtcatcacgatgctcgaacctctcggacggctggca
agcgtgaacctcaaaattcacgaagccctgtcggccgtcgaaaggctctttcaaatcctg
gatctcgaggtcgaaccgatcggttatgatcaggcgcccttcacgcacattcgacgcgag
attcagctgcagaacgtcagctttggttacggctcaaagcacgacgtgttggaacaggtg
aatctcacgataccgtcgggcaaaatggtggccatcgtcggcgagagcggctccggcaaa
tcgacgctattaaaactgttgctccgtttccactcgccgtcggccgggcaaatcctggtc
gacggagtcgaccttcgcgattttgcactgggctccctgcgcaatcgcctcggggtcgtc
actcaagacgcgtacgtcttcaccgggtcgattcgcgagaacatctcattaggcagcccg
caagcgacgttgacggacgtcattgccgcggcgaaagccgccggactggatgcatttatc
aacacgctgcctcttcgctacgacacgatggtgggcgagcgcgggtcgaacctctccggc
ggtcagcgtcaacgcttggccatcgcccgagcgctggtaggtcatcctgagatgcttatt
ttcgacgaggctaccagccaactcgacacggccaccgagcggcagatccaagagaatcta
cgcaagacgctcgccggaagaaccgtgctggtcgtcgcgcatcggctcagcacgatcatg
gacgcggacttgatctacgtgatgcagtctggacgggtcgccgagtgcggaagtcacggc
gagttgctggccgcgggcggcgcctacgccaaactctgggaatcgcagacgacctcgctc
gacggattgttccacctgccgccggcgctcaacggacgtgccctggccaatcgcatttca
cacgcattttcggaaggttaa
DBGET
integrated database retrieval system
