Lacipirellula limnantheis: I41_39360
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Entry
I41_39360 CDS
T09857
Symbol
ntrC
Name
(GenBank) Nitrogen assimilation regulatory protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llh03000
]
I41_39360 (ntrC)
Transcription factors [BR:
llh03000
]
Prokaryotic type
Other transcription factors
Others
I41_39360 (ntrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA_19
AAA
AAA_22
AAA_30
bpMoxR
ATPase_2
T2SSE
NACHT
AAA_33
MCM
AAA_7
AAA_14
NTPase_1
Snx8_BAR_dom
AAA_2
AAA_29
TniB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QDT74737
UniProt:
A0A517U291
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Position
complement(4846110..4847690)
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AA seq
526 aa
AA seq
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MKQVAFGLLGSRLDQSIDDANRWQTWRPSVAICQHEDLLIDQFELIYDAAMARLANGVAD
DIRSVSPETEVRLHELTFQDPWDFEEVYGGLHAFASAYAFRPESERYLVNITTGTHVQQI
CLFLLAESGHIPGRLLQASPPRRQQEGQGTYRIIDLDLSRYDQLAARFALEQQESLSFLK
SGIQTRNAAFNSLIEQIERVAINSRAPLLITGPTGAGKSQLARRVFELKQQRRQLAGRFV
EVNCATLRGDQAMSALFGHEKGAYTGATTKRDGLLRAADGGMLFLDEIGELGLDEQAMLL
RAIEEKRFFAVGADREVASDFQLIAGTNRDLQRAVDEGRFREDLLARINLWTFCLPGLAE
RREDIAPNLEYELTQFSAKTGQVVRMNKEATQRFLQFAETEAAAWRANFRDLNAAVTRMA
TLAAGGRISIDLVEEEIKRLQTQWRPCVVNQRGRSLHGLVDESQLDNFDRVQLEEVVRVC
RQCKTISDAGRKLFAVSRTLKAKPNDADRLRKYLARFDLTWEALNS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtcgccttcggcctccttggatcccggctcgaccaaagcatcgatgacgcg
aaccgctggcaaacctggcggccttcggtcgcgatttgccagcacgaagacttgctgatc
gatcagtttgagctgatctatgacgctgccatggcgcggctggccaatggcgtcgccgac
gacatccggtcggtctccccggagacggaggtgaggctccacgaactcaccttccaagat
ccgtgggatttcgaggaggtctacggcggtctccatgcttttgcgagcgcgtacgcgttt
cgaccggaatcagagcggtatctcgtcaacatcaccacgggcacccacgttcagcagatc
tgcctcttcttgctggccgaatcgggacatatccccgggcggctgctgcaggcctcgccg
ccgcggcgccagcaggaaggtcaagggacctatcggatcatcgatcttgatctgtcgcgt
tatgatcagctcgctgcgagattcgccctggagcagcaggagagcttgtcgttcctgaag
tcgggaattcaaactcgcaatgcggcgttcaactcgctcattgagcagatcgaacgcgtc
gccattaacagtcgggcgccgctgttgatcacgggtcccactggcgccgggaaaagtcaa
ctcgctcgtcgcgttttcgaactcaagcagcagcgccggcagctggctggtcgcttcgtc
gaggtgaactgcgccacactgcgcggcgaccaggcgatgtcggcccttttcggccacgag
aagggtgcttacaccggcgccaccaccaagcgtgacggcctgctgcgcgccgccgatggc
ggaatgctcttcctcgatgagatcggcgagcttggcctcgacgaacaagcgatgttgctg
cgagccatcgaagagaagcgattcttcgccgtcggcgccgaccgtgaggtcgccagcgac
tttcaactgattgccggcaccaatcgtgatttgcagcgcgcggtggatgagggccggttt
cgcgaggacttgctggcaaggatcaacctctggacgttctgcctaccgggcttggccgag
cggcgcgaggatatcgcccccaacttggagtacgagctgacgcaattctcggcaaagacg
gggcaagtcgtgcggatgaacaaggaggcgacgcaacgattcttgcagttcgccgagacg
gaggccgcggcgtggcgggccaacttccgcgacctcaacgccgccgtgacgcgcatggcg
accctcgccgccggcgggcggatttcgatcgatctcgtggaagaagaaattaagcgtttg
cagacgcagtggcggccgtgcgtcgttaaccagcgcggccgctcgctgcatggcctcgtc
gacgagagccaacttgacaactttgaccgcgtgcaacttgaagaagtggtgcgggtctgc
cgtcaatgcaagacgatctccgacgccggtcgaaagctgttcgccgtctccagaacgttg
aaggcaaagcccaacgacgccgatcgactgcggaagtacctcgccaggttcgatctgacc
tgggaagcgttgaactcatag
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