Lacipirellula limnantheis: I41_46120
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Entry
I41_46120 CDS
T09857
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llh03019
]
I41_46120 (yhaM_2)
Messenger RNA biogenesis [BR:
llh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I41_46120 (yhaM_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QDT75402
UniProt:
A0A517U447
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All DBs
Position
5661623..5662591
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AA seq
322 aa
AA seq
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MPDRRFVSQLAHNEPVQQVFLASEKLLRPNKNGNLYLQVDLSDRSGSINTRMWNASEDDY
KAFENGDFVVVDGATQLFQGTMQLIANRIRRARPDEVCEADFMTLQSADVDRMRARLVEI
LAKIQTPPLQRLVKAFVDDQSFMDKFCLAPAGMKNHHAYKSGLLEHVVSLMELVLVVAPR
YPQLDGDKLLVGAFLHDAAKVDELSYERDIAYTDEGQMLGHMIMAITMVDDKVREAIRKD
GMPMPEKLITEIKHMIVSHHGEYEYGSSKLPMTLEAVALHHLDNLDAKLASFTQLIKDCP
NADSPWTQYFTQIGRKLYKGAI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcgtcgcttcgtcagccaactcgcccataacgaaccagtgcagcaagttttt
ctcgcctccgagaagctgctgcggccgaacaagaacggcaacctctatctgcaggtcgat
ctgagcgaccggagcgggtcgatcaacacccgcatgtggaacgccagcgaggacgactac
aaggcgttcgagaacggcgacttcgtggtggtcgacggcgcgacgcagttgttccagggg
accatgcagctgatcgccaaccgcatccgccgggcgcggcccgacgaggtgtgcgaggcc
gatttcatgacgctgcagtcggccgacgtcgatcggatgcgagcccggctggtggagatc
cttgccaagatccaaacgccgccgctgcaacggctcgtcaaggcgttcgtcgacgaccaa
tcgttcatggacaagttctgtctggccccggccggcatgaagaaccaccacgcctacaag
agcggcttgctcgagcatgtggtgagcctcatggagctggtgctggtcgtggccccgcgc
tatccgcagctcgacggcgacaagctgctggtcggcgccttcctgcacgacgcggccaaa
gtcgacgagctgagctacgaacgcgacatcgcctacaccgacgaaggccagatgctcggc
cacatgatcatggcgatcacgatggtcgacgacaaagtccgcgaagcgatccgcaaagac
gggatgccgatgccggagaagctgatcaccgaaatcaagcacatgatcgtgagccaccac
ggcgagtacgagtatggcagttcgaagctgccgatgacgctcgaagcggtggcgctgcac
catctcgacaacctcgacgcgaagctggcgagctttacgcaactgatcaaagactgcccg
aacgcggatagtccttggacgcagtacttcacgcagatcgggcggaagctctacaaggga
gcgatataa
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