Lacipirellula limnantheis: I41_51930
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Entry
I41_51930 CDS
T09857
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
llh
Lacipirellula limnantheis
Brite
KEGG Orthology (KO) [BR:
llh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llh03016
]
I41_51930 (miaB)
Enzymes [BR:
llh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
I41_51930 (miaB)
Transfer RNA biogenesis [BR:
llh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
I41_51930 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Mur_ligase_C
DUF3079
HepII_C
Motif
Other DBs
NCBI-ProteinID:
QDT75948
UniProt:
A0A517U5P3
LinkDB
All DBs
Position
complement(6348636..6350057)
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AA seq
473 aa
AA seq
DB search
MTKKLYIETVGCQMNVLDSELVVASLRKRGYELTRDSGDADTILFNTCSVREHAEEKIYS
ALGRLKNAKQKNPNKIIGVIGCMAQNHQRTVFERAPYVDLVVGPGQLHQVPDLIDKIAAG
GGQQLEVSLGRKDGTRTEIERSHESFDPLRDPSMRPTPFQAYVRIQIGCDKFCTYCIVPS
VRGPEQSRHPEDILAEARQLASEGCKEITLLGQTVNSYRYRDGDRTTRMSDLLYALHEIE
GIERLKFVTNYPKDMTDDLLAAVRDLPKACKYLHVPAQTGSNRMLQRMKRGYTIEEYREM
HQRIREWLPEAAVTSDFIVGFSGETDEDFELSCDLVRECRFKNSFIFKYSVRPGTKGADL
YADDVPEETKRVRNNELLALQNEICEADNQRFLGRQVEVLIEGRSKAAERRDEQGDAVQL
VGRTMCDRIVVFDGNLRQVGQTLPISIYDANAHTLFGAVVTQHVGPELFSLTT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaaactctacatcgagaccgtcggctgccagatgaacgtgctcgacagcgag
cttgtcgtcgctagtctgcgcaaacgtggctacgagctgacccgcgactcgggcgacgcc
gacacgattctcttcaacacttgcagcgtccgcgaacatgccgaggagaagatctacagc
gccctcggccgcctgaagaacgcgaagcaaaagaacccgaacaagatcatcggcgtcatc
ggctgcatggcgcagaatcatcagcggacggtcttcgaacgcgctccctatgtcgacctt
gtcgtcggcccgggccaactccatcaggtccccgatctgatcgacaagatcgccgccggc
ggcgggcagcagctggaagtcagcctcggccgcaaggacggcacccgcaccgaaatcgag
cggagccacgaaagcttcgacccgctccgcgacccttcgatgcggccgacgccgttccag
gcctacgtccgcattcagatcggttgcgacaagttctgcacctactgcatcgttcccagc
gttcgcggccccgagcaaagccgccatcccgaagacatcctcgccgaggcccgccaactc
gccagcgaaggctgcaaagaaatcacgctcctggggcaaacggtcaacagctaccgctat
cgcgacggcgaccgcacgacgcggatgagcgacctgctctacgcgttgcacgagatcgaa
gggatcgagcggctgaagttcgtcacgaactatccgaaggatatgaccgacgacctgctc
gccgcggtgcgcgacctgccgaaggcctgcaagtatctccacgtccccgcgcagacgggg
tcgaaccgcatgttgcagcggatgaagcgcggctacacgatcgaagagtaccgcgagatg
caccagcgcatccgcgagtggctccccgaagcggcggtcaccagcgacttcatcgtcggc
ttctctggcgagaccgacgaagatttcgagctgtcgtgcgacctcgtccgcgagtgccgc
ttcaagaacagcttcatcttcaagtacagcgttcgccccggcacgaagggcgccgatctc
tacgccgacgacgttccggaagagacgaaacgcgttcgcaataacgaattgctggcgctg
cagaacgagatttgcgaggcggacaaccagcgtttcctcggccggcaagtcgaggtgctg
atcgaaggtcgcagcaaggccgccgaacgccgcgacgagcagggcgatgccgttcaactg
gtcggccgcacgatgtgcgaccggatcgtcgtcttcgacggcaacctccgccaggtcggc
cagacgctcccgatttcgatctacgacgccaacgcgcacaccctcttcggcgccgtggtc
acccaacacgtcggcccggaattgttttcgctaactacataa
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