Lactococcus lactis subsp. cremoris UC509.9: uc509_0369
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Entry
uc509_0369 CDS
T02415
Symbol
rheA
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
uc509_0369 (rheA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lli03019
]
uc509_0369 (rheA)
03009 Ribosome biogenesis [BR:
lli03009
]
uc509_0369 (rheA)
Enzymes [BR:
lli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
uc509_0369 (rheA)
Messenger RNA biogenesis [BR:
lli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
uc509_0369 (rheA)
Ribosome biogenesis [BR:
lli03009
]
Prokaryotic type
rRNA helicases
uc509_0369 (rheA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFW91035
LinkDB
All DBs
Position
366721..368376
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AA seq
551 aa
AA seq
DB search
MKFSELGLSEGIVKTLTEIGYEQPTPIQEETIKLALEGRDVLGQAQTGTGKTAAFGLPTI
EKINAENPAIQALVIAPTRELAVQGQEELFRFGKSKGLKVRTVFGGSSIEKQIKGLKAGA
HIVVGTPGRLVDLIKRKAIKLDQLETLILDEADEMLNMGFLEDIHFIIEKTPENRQTLLF
SATMPADIKKIGVKFMKNPEHIKIAAKEMTADRIDQYFVKTKEFEKFDVLTRLLDVERPQ
LAIVFGRTKRRVDELIRGLKLRGYRAEGMHGDLDQNKRLAVLRDFKAGHIDVLVATDVAA
RGLDVSGVTHVYNYDITQDQESYVHRIGRTGRAGKSGRSVTFVSYNEMGYLRAIEKLTNK
EMKGLKPPTKEEAYQASLSVAMDDVLRDLSDESGKAKLAKFDKQAASLLEKFDAKELVAL
LLQGRVKDPDNQEEVKITAERPLPYNGEGKGFKKKGKGGGGRYKGRGNGDRDGNRDGNRG
GYRGNRDSKDGERGGDRKRNWKDRDDNRGGYRGKRDDRRFDDRKQGEKTPRKRTTGTEKS
AGFVMRSRGDK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaactcggcctgtcagaaggaatcgtaaaaacacttacagagattggt
tatgaacaacctacaccaatccaagaagaaacaattaaattggcgcttgaaggacgtgac
gttcttggtcaagcgcaaacagggactggtaaaacagcggcatttggtcttcctactatt
gagaaaatcaatgctgaaaatccagccattcaagcacttgttattgctccaacccgtgaa
cttgcagttcaaggacaagaagaacttttccgttttggtaaatcaaaaggacttaaagtt
cgtactgtattcggtggttcaagtattgaaaaacaaatcaaaggacttaaagctggcgca
catatcgttgtgggaacaccaggtcgtttggttgacttgattaaacgtaaagcaatcaaa
cttgaccaacttgaaactttgattcttgatgaagcagatgaaatgcttaacatgggattt
ttggaagacattcattttattattgaaaaaacaccagaaaatcgtcaaacattgcttttc
tcagcaacaatgcctgctgatatcaaaaaaattggtgtgaaattcatgaagaatcctgaa
cacatcaaaattgcagccaaagaaatgactgctgaccgtattgaccaatactttgtgaaa
acaaaagaatttgaaaaatttgatgttttgactcgtttgcttgatgttgaacgtccacaa
cttgcaattgttttcggtcgtacaaaacgccgcgttgacgaattgattcgtggtcttaaa
ttgcgcggatatcgtgctgaaggaatgcacggagatttggaccaaaacaaacgtttggcc
gttttgcgtgatttcaaagctggacatattgatgtcttagttgctactgacgttgccgct
cgtgggcttgacgtatcaggtgtaacacacgtttacaactacgatattacccaagaccaa
gaaagctatgttcaccgtatcggacgtacaggtcgtgctggtaaatcaggccgctcagta
acttttgtttcatacaatgaaatgggctaccttcgtgccattgaaaaattgacaaacaaa
gaaatgaaaggcttgaaaccaccaacaaaagaagaagcttaccaagcgtcactttctgtt
gcgatggatgatgttcttcgtgatttgtctgatgaatcaggtaaagcaaaattagcaaaa
tttgacaaacaagcagcaagcttacttgaaaaatttgatgctaaagaattggttgcctta
cttctccaaggacgtgttaaagacccggataaccaagaagaagttaaaattacagccgaa
cgtccattaccatacaatggtgaaggaaaaggattcaagaaaaaaggtaaaggtggcggc
ggacgctacaaaggccgtggaaatggcgaccgtgatggtaatcgtgacggaaaccgtgga
ggctaccgtggtaatcgtgattctaaagatggcgaacgcggtggagatcgtaaacgtaac
tggaaagaccgtgatgataatcgtggaggttaccgtggaaaacgtgatgaccgtcgcttt
gacgaccgtaaacaaggtgaaaaaactcctcgtaaacgtaccacaggaactgaaaaatca
gctggcttcgtaatgcgtagccgtggcgataaataa
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