Lactococcus lactis subsp. cremoris UC509.9: uc509_0373
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Entry
uc509_0373 CDS
T02415
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
uc509_0373 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_0373 (fpg)
Enzymes [BR:
lli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
uc509_0373 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
uc509_0373 (fpg)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
uc509_0373 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AFW91038
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All DBs
Position
371866..372684
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AA seq
272 aa
AA seq
DB search
MPELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKIIQGILRRGKYL
IFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSDGQLIYADVRKFGTWELIST
DQEIPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLW
LAKIHPEKEANQLTESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYG
KTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaaccgttagaagagaacttgaaaaaagaattgttgga
caaaaaattatatctatagaagccacttatccaagaatggtcttaactggttttgagcaa
ttgaaaaaagaattgacaggaaaaatcattcagggcatcttgcggcgagggaaatattta
atttttgaaattggagatgactttcgcttgatttctcatttacgaatggaagggaaatat
cgcttagcaacacttgatgcaccaagagaaaagcatgaccatttgacaatgaaattttct
gatgggcagttaatctatgccgatgtaaggaaatttggaacttgggaattgatttctact
gaccaagagattccctattttctgaacaaaaaaattggaccagaaccgacctatgaagat
tttgatgaaaagctttttcgagagaaattaagaaaatcaacaaagaaaataaaaccttat
ttacttgagcaaacccttgttgctgggcttggcaatatttatgttgatgaagtgctctgg
ttagcaaaaattcatccagaaaaagaggctaatcagctgacagaaagttccatccacctt
ttgcacgactcaattattgaaattttgcaaaaagcgattaagcttggtggttcaagtatt
agaacttatagtgccttaggatcaactggtaaaatgcaaaatgagttgcaagtttatggt
aaaacgggtgaaaaatgttcccgttgtggtgcagagattcaaaaaataaaagttgctggt
cgaggcactcatttttgcccagtttgtcagcaaaaataa
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