Lactococcus lactis subsp. cremoris UC509.9: uc509_0417
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Entry
uc509_0417 CDS
T02415
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
uc509_0417 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lli03019
]
uc509_0417 (groEL)
03110 Chaperones and folding catalysts [BR:
lli03110
]
uc509_0417 (groEL)
03029 Mitochondrial biogenesis [BR:
lli03029
]
uc509_0417 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lli04147
]
uc509_0417 (groEL)
Enzymes [BR:
lli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
uc509_0417 (groEL)
Messenger RNA biogenesis [BR:
lli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
uc509_0417 (groEL)
Chaperones and folding catalysts [BR:
lli03110
]
Heat shock proteins
HSP60 / Chaperonin
uc509_0417 (groEL)
Mitochondrial biogenesis [BR:
lli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
uc509_0417 (groEL)
Exosome [BR:
lli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
uc509_0417 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
uc509_0417 (groEL)
Exosomal proteins of breast cancer cells
uc509_0417 (groEL)
Exosomal proteins of colorectal cancer cells
uc509_0417 (groEL)
Exosomal proteins of bladder cancer cells
uc509_0417 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1382
DUF4142
Motif
Other DBs
NCBI-ProteinID:
AFW91075
LinkDB
All DBs
Position
413946..415574
Genome browser
AA seq
542 aa
AA seq
DB search
MSKEIKFSSDARTAMMRGIDILADTVKTTLGPKGRNVVLEKSYGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPVGIRRGIE
LAAETAVASIKEMAIPVHDKSAIAQVATVSSRSEKVGEYISDAMERVGSDGVITIEESKG
MQTELDVVEGMQFDRGYLSQYMVSNTEKMVAELDNPYILITDKKISNIQEILPLLEQILK
TNRPLLIVADDVDGEALPTLVLNKIKGVFNVVAVKAPGFGDRRKAQLEDLAILTGGTVIT
EELGLDLKDATLEALGQAAKATVDKDHTTIVEGAGSVDAISDRVAIIKAQIEKTTSDFDR
EKLQERLAKLAGGVAVVKVGAATETELKAMKLLIEDALNATRAAVEEGIVSGGGTALVNA
IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEKVGTGFNAATG
QWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAVVANKPEPAAPAMPPMDPSMGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaattaaattttcaagtgatgctagaacagcgatgatgcgcggaattgat
attcttgccgatacagtaaaaacaacccttgggccaaaagggcgtaatgttgttcttgaa
aaatcatatggttcacctttaattacaaatgatggtgttacaattgccaaagagattgaa
cttgaagaccattttgaaaatatgggagctaaacttgtttcggaagttgcttcaaaaaca
aatgatattgcaggtgatggaacaacaacagcgacagttttgacacaagctattgttcgt
gaaggattgaaaaatgttactgcaggtgcaaatccagttggtattcgccgaggaattgaa
ctcgcagctgaaacagcagttgcttcaattaaagaaatggcaattcctgttcatgataaa
tcagcaatcgctcaagttgctaccgtttcatcacgtagtgaaaaagttggggaatatatt
tctgacgcaatggagcgtgtaggttctgacggagttatcacaatcgaagaatcaaaagga
atgcaaacagagcttgatgttgttgaaggaatgcaatttgaccgtggatacttgagtcaa
tatatggtttctaatacagagaaaatggttgctgagttagataatccttatattctgatt
acggataaaaaaatctcaaatattcaagaaattttaccgcttcttgaacaaattttgaaa
acaaatcgtccacttttaattgttgctgatgatgttgatggagaagcattgccaactctt
gttcttaataagattaaaggggtcttcaacgtagtcgctgtaaaagcaccgggatttggt
gaccgccgtaaagctcaattggaagatttagctatcttgacaggtggtacagtaattact
gaagaactaggccttgatcttaaagatgctacactagaagctttaggacaagctgctaaa
gcaactgttgataaagaccatacaacaattgttgaaggtgctggttctgttgatgccatt
tctgatcgtgtggctatcatcaaagcacaaatcgaaaaaacaacttctgattttgaccgt
gaaaaattgcaagagcgcttagcaaaattagctggtggagttgcggtagttaaagtagga
gccgcaacagaaacagaacttaaagcaatgaaacttttgattgaagacgcacttaatgca
acacgtgctgctgttgaagaaggtatcgtttctggtggtggtacagctcttgttaatgcc
atcgcagctttggataaactttcagaagaaggcgacattcaaacaggaattaacatcgtt
cgccgtgcgcttgaagaaccagttcgtcaaatcgcggccaatgcaggatatgaaggttca
gttatcattgataaacttcgttcagaaaaagttggtacaggatttaatgcagcgacaggt
caatgggtaaatatgattgaagaaggaatcgttgacccggcaaaagtgactcgttcagct
ttgcaaaatgcagcttctgttgctggattaatcttgactactgaagcagttgtggctaat
aaaccagaaccagctgctccagctatgcctccaatggatcctagcatgggaatgggtggt
atgatgtaa
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