Lactococcus lactis subsp. cremoris UC509.9: uc509_0517
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Entry
uc509_0517 CDS
T02415
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03030
DNA replication
lli03430
Mismatch repair
lli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
uc509_0517 (dnaE)
03430 Mismatch repair
uc509_0517 (dnaE)
03440 Homologous recombination
uc509_0517 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lli03032
]
uc509_0517 (dnaE)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_0517 (dnaE)
Enzymes [BR:
lli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
uc509_0517 (dnaE)
DNA replication proteins [BR:
lli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
uc509_0517 (dnaE)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
uc509_0517 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Rrn7_cyclin_C
DUF4351
Motif
Other DBs
NCBI-ProteinID:
AFW91149
LinkDB
All DBs
Position
507842..511054
Genome browser
AA seq
1070 aa
AA seq
DB search
MFAPLNTKTEYSFLDSVVKLDDYLEGALRLGYKTVGICDVGNLHAAFRFVRQAQMLNLQP
VISIELNFEWRGLPVSFSFIAKNTEGYKNLLRISTFHNYDRRQFSDIQNHLSGIALVIPE
TYGALSELSELAAFADEAYIGIDQQTNKGTKFNLPTLPFPAVRYLNFADNEILAILHAVR
DGLSFDESLTVSSNELLQRPEAYESYFQKYFLQALTNLSVLTAKIAYQFDEKLELPRFDK
KREAVEHLREEAILGLSARLEEKKSLTGISSVSLANALAEESTMIDLSVYQERLEKELSV
IHQMGFDDYFLIVADLLRYAREQDIYCGMGRGSAAGSLVAYVLGITQVDPVKHNLFFERF
LNPERVAMPDIDIDMPDDRRAELLAYMKNRYGSDHVAQIVTFSTLGKRQALRDVGKAFGM
TEAELSNLTRMLVRRFGTLADEYENNQRFKAEVLKNGKLKRIYEVARRIEGMPRQTSTHA
SGVVLSEESLVNYVSLKPSEDLALTQYEAPDVEAIGLLKIDFLGLRNLTIISRLRDLVKK
RQKIDIDPLKIDLEDEATLALFRAGNTMGIFQFENPQMRRFLRNLAPSKFDDIVDATSIF
RPGPSQFIPQFVARRHGKEIVPVVDDSISEILKPTYGIMIYQEQIMQVAQAFAGFSLGKA
DLLRRAISKKKGSELEKLREDFLISAGEMGHSKEKAEEIYDLIERFANYGFNRSHGFAYG
ALAFQIAYFKAHFPDEFYEIQLRDRKREVMILDALDNGFEIEKPNINQMKIGDFVKNKKI
RLGLAHVQGISRDLAKWIVENQSYKNLADFVEKLPNNFHKKESILPLIQIGAFDYADSNR
GKLAYNLADHANLLNYYSDDIFMASSGGGFAYHEAEDYSEAEKYDFEKNLLGIGVTPHPL
QSLAQRFSGNFTPIANLVKNSRMTILVEINYIRTHRTKTGQTMAFLTVSDSRENFDVTLF
PEIYRQFSSELEQGKFYLISGKVTERNDELQLVADRMSPALETDKKLWLNLRDEKYNQKI
SQILCEFPGSHQVILHYSNLKKTIQTKIYVEESEFLKKRLEGYVIGIVYK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacccttaaatacaaaaacagaatacagttttttagatagtgttgttaaacta
gacgattatttggaaggggctctacgtttaggctataaaacggtcggaatttgtgatgtg
ggaaacctccatgcagcctttcggtttgttagacaagctcaaatgcttaatttacaacca
gttattagtattgaattaaattttgaatggcggggtttgccagtttctttttcttttatt
gctaaaaatacagaaggttataaaaacttacttcggatttcaacatttcataattatgat
cgacgtcaattttctgatattcaaaatcatttgtcaggaatcgcactggttattccagaa
acttatggggctttaagtgagctatcagagcttgcagcatttgccgacgaagcctatatt
gggattgaccagcagacaaataaaggaactaaatttaatttaccaacccttccttttcca
gcagttcgttatctgaattttgctgataatgaaattttagctattttgcacgcggtgcgt
gatgggctttcctttgacgaaagtttgacggtcagttcaaatgaattgctccaaagacca
gaagcttatgaatcttattttcagaaatattttctgcaagcactgacaaatctgtcagta
ttaacagcaaaaattgcttatcaatttgatgaaaaattggaacttccgagatttgataag
aaaagggaagcagttgaacatctccgagaagaagcgattttaggactgtctgcccgactt
gaagaaaaaaaatcactgacaggaatttcgtcagtaagtctggcaaatgctttagctgaa
gaatcaacgatgattgatttgtcagtatatcaggagcgtttagaaaaagagttgtcagtc
attcaccaaatgggatttgatgattattttttgattgtcgcggatttgttgcgctatgcg
cgtgaacaagacatttattgcggaatggggcgtgggtcggctgctgggtctttggttgcc
tatgttttgggaatcactcaggttgaccctgtcaaacataatcttttctttgaacgtttt
ttgaatccagaacgagtggccatgcccgatattgatattgatatgcctgatgaccgtcgt
gctgagttactggcctatatgaaaaatcgttatggttcagaccatgtagcacaaattgtc
actttttcaactttaggaaaaagacaggcgctcagagatgtcggtaaagcttttggaatg
accgaagctgaattatctaatttgactcggatgcttgttcgccgttttggaactctggct
gatgaatatgaaaataatcaacgttttaaagccgaagtattgaaaaatggaaaattaaaa
cgaatttatgaagtcgccagacgaattgagggaatgcctcgccagacttcaacacatgct
tcaggtgttgttctttctgaagaatctttggtgaattatgtgtcattaaaaccgtcagaa
gatttagctttgactcaatatgaggcaccagatgtggaagcgatagggcttctaaaaatt
gacttcctgggattacgtaatttaactatcatttcgagattacgtgatttggtgaaaaaa
cgtcaaaaaattgatattgacccgttaaaaatagatttagaagatgaagcgacattggca
ctttttagagctggaaatacgatgggaatttttcagtttgaaaatccgcaaatgcgacgt
tttctaagaaaccttgcaccaagcaaatttgatgatattgttgatgcaacctcgattttc
cgtcccggtccatcacagtttattccacaatttgttgccagacgccatggaaaagaaatt
gttccagttgtcgatgattctatcagtgaaatcttaaagccgacttatggaattatgatt
tatcaggaacaaatcatgcaagtggctcaagcttttgccggattttctcttggaaaggct
gaccttcttagacgagcaatctctaagaaaaaagggtccgagttggagaaactgcgcgag
gatttcttaatttctgcaggagaaatgggtcattctaaagaaaaagcagaagaaatttat
gacctgattgaacgttttgccaattacggcttcaaccgttcgcatggcttcgcttatgga
gcgcttgcttttcaaatcgcttattttaaggcacatttccctgatgaattttacgaaata
caattacgtgaccgtaaacgggaagtcatgattttagatgctttggacaatggttttgag
attgaaaaaccaaatattaatcagatgaaaattggtgattttgtaaaaaataaaaagatt
cgattaggattagctcatgttcaaggaatttctcgcgatttggcaaaatggattgttgaa
aatcaatcatataagaatttggcagattttgttgagaaattacccaataattttcataaa
aaagaaagtattctaccactaatccaaattggtgcttttgattatgctgattctaatcga
gggaaattggcttataatttggctgaccatgctaacttactaaattattatagtgatgat
atttttatggcaagttctggtggcggttttgcttatcatgaagcagaggattattcagaa
gcagaaaaatatgattttgagaaaaatctgttagggattggtgtaacgccccatccttta
caaagtttggctcagagattctcaggaaatttcacgccaattgctaatcttgtcaaaaat
agtagaatgacgattttggttgagattaattatattcggacccatcgaacaaaaacaggg
caaacaatggcatttttaactgtgtcagatagtcgtgagaattttgatgttactcttttt
ccagagatttatcgtcaattttcgagtgagcttgagcaaggaaaattctacctgattagt
gggaaagtaaccgaacgtaatgatgaattacagcttgtcgctgaccgaatgagtccagct
ttggaaactgataaaaaactttggttaaatttaagagatgagaaatataatcaaaaaatt
tcgcaaattttatgtgaatttccgggttctcatcaagtgattcttcactattcaaatttg
aaaaaaacgattcaaacaaagatttatgtggaagagtcggagtttttgaaaaaacgattg
gaaggatatgttattggtatagtttataaataa
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