Lactococcus lactis subsp. cremoris UC509.9: uc509_1605
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Entry
uc509_1605 CDS
T02415
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03030
DNA replication
lli03430
Mismatch repair
lli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
uc509_1605 (holA)
03430 Mismatch repair
uc509_1605 (holA)
03440 Homologous recombination
uc509_1605 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lli03032
]
uc509_1605 (holA)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_1605 (holA)
Enzymes [BR:
lli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
uc509_1605 (holA)
DNA replication proteins [BR:
lli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
uc509_1605 (holA)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
uc509_1605 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
30K_MP_C_Ter
DUF5405
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AFW92077
LinkDB
All DBs
Position
complement(1597528..1598532)
Genome browser
AA seq
334 aa
AA seq
DB search
MTVFDEFNEVKRKGLPQILVIFGESKEMVQELKSQLLTFVNFEPTDLSQSYYDLTPNNSD
LALEDLESLPFFSDSRLVILENLVNLTTAKKTILYEKQLKRFENFLDNPSETTQLVLVLY
GKLDSRLKVVKKLKAKATLLEAQELKTQELIQYFSHETSLPRPVLSLIAAKSNDSFSVVK
QNIDLVQTYALGREVTVDDVEKVVPKSLQDNIFALTDLIFKGKIDEARDLVHDLTLQGED
LIKILAILTNSYRLYLQVKLFQEKGWQENQQVSYLKMHPYPVKLANQLVRRLQVSSLKKG
LADLIQLDFAIKTSAADKAYLFDILLIKLTLKKN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatttgatgaatttaacgaagtcaaaagaaaagggctccctcaaattttagta
atttttggtgagtcaaaagaaatggttcaagaattaaaaagccagttattgacttttgta
aattttgaaccgacagatttaagtcaatcctactatgacttaacgcctaataatagcgat
ttagccttggaagacttggaatcccttcccttcttttctgattctcgtctagttattttg
gaaaacttggtcaatttaacaacggctaaaaaaactattttatatgaaaaacagcttaag
cgttttgaaaattttttagataatccttcggaaaccacccagcttgtgttggtactctat
ggaaaattggacagtcgtctaaaagttgtcaaaaaactaaaagccaaagcaactttgctt
gaagcacaggaattaaaaacacaagaactcattcaatattttagtcatgaaacttcactg
ccacgacctgtattaagtctaattgcagccaaatctaatgacagtttttcagtagtgaag
caaaatattgatttagttcaaacttatgctttagggcgtgaagtcacggtagatgatgta
gaaaaagtagttccaaaatcactacaagataatatctttgccttgactgacttaattttt
aaaggaaaaattgatgaagcgcgtgatttagttcatgatttaactttacaaggagaagat
ttaattaaaattttagcgattttgactaattcttatcgattgtatttgcaagtcaaactt
tttcaagaaaagggttggcaagaaaatcaacaggtttcatatctgaaaatgcacccttat
ccagtgaaattggctaatcaattggtccgaagattgcaagtgagttctttaaaaaaagga
cttgctgatttaattcaactcgattttgcgataaaaacgagtgcagctgataaagcttat
ctttttgatatcctattaatcaagttgaccttgaaaaaaaactga
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