Lactococcus lactis subsp. cremoris UC509.9: uc509_1753
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Entry
uc509_1753 CDS
T02415
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
uc509_1753 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lli03021
]
uc509_1753 (rpoB)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_1753 (rpoB)
Enzymes [BR:
lli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
uc509_1753 (rpoB)
Transcription machinery [BR:
lli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
uc509_1753 (rpoB)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
uc509_1753 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AFW92209
LinkDB
All DBs
Position
complement(1747937..1751452)
Genome browser
AA seq
1171 aa
AA seq
DB search
MPNLIEVQTLSYKNFLDEGLANVFKEMFPIDNFAGTMELEFVGYEMKTPKYTVEEARAHD
ANYSAPIYVTFRLVNKETGELKTQEVFFGDFPLMTEMGTFINNGSERLIVSQLVRSPGSY
FHLKTDKNGLESFGHTTIPNRGAWFELDTDAKGIGYVRIDRTRKLTFTTMLRALGFGSDD
EILELLGETQLLTDTIAKDVHKNPADTRVEEALKDIYDRLRPGEPKTADSSRGLLVARFF
DPKRYDFAPVGRYKFNKKLALKNRLLGLTLAEPIVDPETGEILVNTDTLVTRDVLDLIEP
LLDNGLGNFVVEPSDDAVIPEPITLQSIKVYSPKDSERVVTLLSNGNPDSECRVLTPADV
ISNISYWLGLAEGIGKVDDIDHLGNRRIRSVGELLQNQVRIGLSRMERVIRERMSSSENE
NITPQGLINIRPVTASIKEFFGSSQLSQFMDQHNPLSELSHKRRFSALGPGGISRDRASY
EVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYAKVNEYGFIMSPYRRVDRVNGIVTDEV
EYLTADEEDNYTVAQANSPLTDDSRFANETIMARHTGNNIEVEASTADYMDVSPKQVIAV
AAACIPFLENDDSNRALMGANMQRQAVPLIDPHAPWIGTGMEHQTARDSGAALLAKHAGV
VEYVDGNEIRVRRTSGELDIYNITKYRRSNSGTSYNQRPLARLGEKVEKNDIIADGPSME
NGEMALGQNPLVAYMTWEGYNFEDAVIMSERLIKDDVYTSIAIEEYESETRDTKLGPEEI
TREIPNVGDEALKNLDESGIIRIGAEVKDGDLLVGKVTPKGETDPTPEERLLRAIFGEKA
REVRDTSLRVPHGGGGIVHDVRVFTRENGDELPSGVNKLVRVFIAQKRKIHVGDKMAGRH
GNKGVVSNIVPVEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVMELHLGMAARTLGIHIAT
PVFDGASDEDIWDTVKEAGMAADAKTVLYDGRTGEPFDNRISVGVMYMIKLHHMVDDKLH
ARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAANVLQEILTYKSDDVIGRTRA
YEAIVKGERIPKPGLPESFRVLVKELQSLGLDMKVFDADRNVLDLRELDEDEVMTRPDNT
EITPEMLEAQEAIVAQAEAEEEALINADIEK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaacctcatcgaagttcaaacattaagttataaaaacttcctcgatgaaggtctt
gcaaatgtcttcaaagaaatgtttccaatcgacaactttgcgggtacaatggaactcgaa
tttgttggttatgaaatgaaaaccccaaaatacactgttgaagaagctcgcgcacatgac
gcaaactattcagcacctatctatgtaaccttccgtcttgtaaataaagaaactggtgaa
ttaaaaacacaagaagtcttctttggtgacttcccactcatgactgaaatggggacattt
atcaataatggttcagaacgtttgatcgtcagtcagttggtacgtagtccaggttcatat
ttccaccttaaaacggataaaaatggtcttgaaagttttggacataccacaattcctaac
cgtggagcttggtttgagttggatacagatgctaaaggcattggttatgttcgtattgat
cgtactcgtaaattaactttcacaacaatgcttcgtgcgcttggatttggttcagatgac
gaaatccttgaattgttgggtgaaactcaacttttgacagacacaattgcaaaagatgtt
cataaaaatccagctgacactcgtgtagaagaagccctcaaagacatctatgaccgcttg
cgtccaggagaaccaaaaacagcagacagctcacgtggcttacttgttgcgcgtttcttc
gatccaaaacgttatgattttgctcctgttggacgttataaatttaacaaaaaactagct
cttaaaaatcgtttgcttggtttgactttggctgagccaattgttgatccagaaactggc
gaaattcttgttaatacagatacacttgtgactcgtgacgtgctcgatttaatcgaacca
ttgcttgataatggtcttggaaacttcgttgttgaaccttctgacgatgcagtaattcca
gaaccaatcactttgcaaagtattaaagtttattctcctaaagattcagaacgtgttgtg
acattgctctcaaatggtaatccagattcagaatgtcgtgtcttgacaccagccgatgtt
atttcaaacatcagctactggcttggacttgctgaaggaattggtaaagtagacgatatt
gaccacttaggtaaccgtcgtattcgttcagttggtgagttacttcaaaaccaagtgcgt
atcggactttcacgtatggaacgtgtcattcgtgaacgtatgtcatcttcagaaaacgaa
aatatcacaccgcaaggtttgattaacattcgtcctgtaacagcttcaatcaaagaattc
tttggttcatcacagttgtcacaatttatggaccaacataatcctttgtctgagctttca
cacaaacgtcgtttctctgccttaggacctggtggtatctctcgtgaccgtgcttcatat
gaagtgcgtgacgttcactacactcactatggccgtatgtgtcctattgaaacacctgaa
ggaccaaacatcggtttgattaacaacttgtcatcatatgccaaagttaatgaatatggt
ttcatcatgtcaccatatcgtcgtgttgaccgtgtgaatggaattgttactgacgaagtt
gaatatttgactgccgatgaagaagataactacactgtagcccaagcgaactcaccattg
actgatgacagtcgttttgctaacgaaacaattatggctcgtcatacaggtaacaatatt
gaagttgaagcttcaacagctgactatatggatgtttcacctaaacaggttatcgccgtc
gctgctgcttgtattcctttcttggaaaacgatgactccaaccgtgccctcatgggtgcc
aacatgcaacgtcaagcagttccattgattgacccacatgcaccttggattggtactggt
atggaacatcaaaccgctcgcgactcaggagctgcccttcttgctaagcatgcaggtgta
gttgaatatgttgacggtaatgaaatccgtgttcgccgtacatctggtgaacttgatatt
tacaatattacaaaatatcgtcgttctaactcaggaacttcttataatcaacgtccattg
gctcgtcttggcgaaaaagttgaaaaaaacgacatcatcgctgacggtccatctatggaa
aatggagaaatggcccttggtcaaaatccactcgttgcctatatgacttgggaaggttat
aacttcgaggatgccgtaatcatgtctgaacgtttgattaaagatgacgtttatacatca
atcgcaatcgaagaatatgaatcagagactcgcgatacaaaacttggccctgaagaaatt
acacgcgaaattccaaacgtcggggatgaagcactcaaaaaccttgatgaatcaggaatt
atccgtattggtgccgaagttaaagatggtgatttgcttgttggtaaagttacacctaag
ggtgaaactgacccaacaccagaagaacgtttgcttcgtgcaatcttcggtgaaaaagct
cgtgaagttcgtgatacttcacttcgtgttcctcacggtggaggcggtatcgttcatgac
gttcgcgtatttacccgtgaaaatggtgatgaattaccatcaggtgtgaataaactcgtt
cgtgtcttcattgctcaaaaacgtaagattcacgttggggataaaatggccggtcgtcac
ggtaacaaaggggttgtttcaaatatcgttcccgtggaagatatgccttacttaccagat
ggaacaccgattgatatcatgttgaacccacttggggtaccatcacggatgaatattgga
caagttatggagctccatttaggtatggctgctcgtacacttggtattcacattgcgaca
ccagtgtttgatggagcctctgatgaagatatctgggatactgttaaagaagctggtatg
gctgctgatgcgaaaacagttctctatgacggacgtactggtgaaccatttgataaccga
atttcagtcggtgtcatgtacatgattaaacttcaccacatggttgatgataaactccat
gcacgttcagttggtccttactcactcgttacacaacaaccgctcggtggtaaagcacag
ttcggtggacaacgtttcggggaaatggaagtttgggcgcttgaagcttatggtgctgcc
aatgttcttcaagaaatcttaacttacaaatcagatgacgtaattggacgtacgcgcgcc
tatgaagctatcgttaagggtgaacgtattcctaaaccaggtcttcctgaatcattccgc
gtattggttaaagaattacaatcacttggtcttgatatgaaagtcttcgatgctgatcgt
aatgttcttgacttgcgtgaattggatgaagatgaagtaatgactcgtccagataataca
gaaattactccggaaatgcttgaagcacaagaagcaattgttgcacaagcagaagctgaa
gaagaagctttgattaacgctgatattgaaaaataa
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