Lactococcus lactis subsp. cremoris UC509.9: uc509_1762
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Entry
uc509_1762 CDS
T02415
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
uc509_1762 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lli03019
]
uc509_1762 (recQ)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_1762 (recQ)
Enzymes [BR:
lli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
uc509_1762 (recQ)
Messenger RNA biogenesis [BR:
lli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
uc509_1762 (recQ)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
uc509_1762 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AFW92218
LinkDB
All DBs
Position
1760667..1762448
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AA seq
593 aa
AA seq
DB search
MNLEIKLKEIFGYDYFRNGQKQIIEQVLAGQATLGILPTGAGKSICYQLPAVIQSGLTLV
ISPLISLMKDQVDQLNIAGIPATFINSILEEGESYQRMRQVENGEIKLLFVAPERFSLDY
FNNFLQKLPINLVAIDEAHCISQWGHDFRPSYVDFAAHLKDLPTRPTVLALTATATPKVA
DDIQSLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESESAGIIYASTRKE
VEEICEWLNHNHFKAVRYHAGLSERERQMNQELFLFDEVPIMVATNAFGMGINKPNVRFV
IHYAIPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQGEGDEGHKELEYEK
LRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERELLDITVDAQKVLSCVVRMGE
RFGKTAVAQVLIGSKNKNIAKWNFEGLSTFGIMKNYSQKTVGELIDFLSAEGYLNVTTGK
FPLLLLSAQGLKVLKGQVKISRRASLIIESKATVVHHFDEECFASIRSLRLELAKEEGVP
PFMIFSDSALKEMAQVLPDSPSQFLQISGVGPVKLEKYGTAFISKISEYEKAK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaaataaaactaaaagaaatattcggttatgattatttccgaaatggtcaa
aaacaaattattgaacaagtcttagcaggacaagctactcttggcattttgcctactgga
gctggaaaatcaatttgttatcaactaccagccgttatccaatctgggctcacactggta
atctcaccacttatcagtctaatgaaagatcaggttgaccaacttaatatcgctggaatc
ccagcaacttttatcaactctattcttgaagaaggtgaatcttatcaaagaatgcgacaa
gtagaaaatggtgaaattaagcttctttttgttgcgcccgaacgtttttcattagattat
ttcaataatttcttacaaaaacttccaattaacttagttgccatcgatgaagcccactgt
atttcgcaatgggggcatgatttcagacctagttatgtcgattttgcagctcatctcaaa
gatttacctacacggcccaccgtcttagctctcactgctactgcgactccaaaggttgcc
gacgatatccaatccttgctctctatatcccccagccacaccatcaaaactggatttctt
cgagaaaacctccgttttgaagtggttaaagggatggataaaagaacttttcttaaaaat
tatcttaaaaatcaggagagtgagtctgctggaattatctacgccagcacccgtaaagaa
gttgaagaaatttgtgagtggctcaaccataatcattttaaagccgttcgttaccatgct
gggctgagcgagcgagaacgtcaaatgaaccaagagctttttctatttgacgaagtgcca
ataatggttgcaaccaatgcttttgggatgggaattaacaaaccaaatgttcgatttgtg
attcactatgccattcccgcaacaattgaaagttattatcaagaagctggtcgtgcagga
cgtgacggcttagaatcagatgcaattttactcttttctccaaatgatttgcgaattcgt
aattttttgattgaacaaggtgaaggggatgagggacataaagaacttgaatatgaaaag
ctccgtcaaatgcaagcttacacaagtgctgaaacttgcctccaacgctatattctccaa
tattttggtgatgaaggagaagactgtaagaaatgtagtaattgtcttgatgaaagagaa
cttcttgatatcaccgttgatgcccaaaaggttctttcttgcgtggtaagaatgggtgag
cgatttggtaagacagctgtagcacaagtgttgattggttctaaaaataaaaatattgcc
aaatggaattttgaaggcctctccacttttggaattatgaaaaattactcccaaaagaca
gtcggagaattaatcgactttttatctgcggagggttatctcaatgttacaactggaaaa
tttcccctccttctcctttcagcccaaggtctaaaagtactcaagggccaagtgaaaatc
tctcgaagagcaagcttgattattgaatctaaggcgactgttgttcatcattttgatgaa
gagtgttttgcaagtattcgttcgcttcgacttgaacttgcaaaagaagaaggcgttcct
ccgtttatgattttttctgatagtgcccttaaagaaatggcacaagttcttccagatagc
ccaagccaatttttacaaatttctggtgtaggtcccgtcaaattagaaaaatatgggacg
gcatttatcagtaaaatatcagaatacgaaaaagctaagtaa
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