Lactococcus lactis subsp. cremoris UC509.9: uc509_2053
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Entry
uc509_2053 CDS
T02415
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
uc509_2053 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lli03021
]
uc509_2053 (rpoA)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_2053 (rpoA)
Enzymes [BR:
lli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
uc509_2053 (rpoA)
Transcription machinery [BR:
lli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
uc509_2053 (rpoA)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
uc509_2053 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AFW92474
LinkDB
All DBs
Position
complement(2040310..2041248)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGSAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAVKGIAIKSYVESEKQIELDVTGPMDVTAGDILTDSDIEIVN
KDHYLFSIAEGHSMRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVSDEALSLSAKILTDHLNLFVDLSEVAAEAETLVVKDE
VKTERVLDKIIEEMDFSVRAYNGLKRAGINTVADIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaaa
ttcgttgttgaaccacttgaacgtggttatggtacaactttaggtaactctctgcgtcgc
gtccttttgtcatcacttcctggttctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatccctggcgtacgtgaagatgtcatccaaatcgttcttgcggtt
aaaggaattgccatcaaatcatacgttgaatctgaaaaacaaatcgaacttgacgttact
ggtcctatggatgttactgctggtgatatcttaactgatagcgacattgaaattgtcaac
aaagaccattacttgttctctattgctgaaggtcactcaatgcgtgctgtaatgactgtt
aaaaaaggatacggctatgttccggctgacgaaaataaagtcgatggagcgccaattggc
acaattgctgtagactcaatttacacaccagtaagtaaagtaaattatcaagttgaacct
gcccgtgttggtggagattctagctacgataaattaacacttgaaattactacaaacggt
actatcgtttctgacgaagctttgtcactctcagctaaaatcttgacagaccacttgaac
ttgttcgttgatctttcagaagttgcagctgaagctgaaacacttgttgttaaagatgaa
gttaaaacagaacgtgtgctcgataaaattattgaagaaatggacttctcagttcgtgct
tacaatggtttgaaacgtgcaggtatcaacactgttgctgatattgttgaaatgagcgaa
gctgacatgattaaagtcaaaaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa
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