Lactococcus lactis AI06: LG36_0004
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Entry
LG36_0004 CDS
T03480
Symbol
rexA
Name
(GenBank) ATP-dependent helicase/nuclease AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
llj
Lactococcus lactis AI06
Brite
KEGG Orthology (KO) [BR:
llj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llj03400
]
LG36_0004 (rexA)
Enzymes [BR:
llj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG36_0004 (rexA)
DNA repair and recombination proteins [BR:
llj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LG36_0004 (rexA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
AAA_30
AAA_22
KdpD
AAA_7
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIS02604
LinkDB
All DBs
Position
6651..10262
Genome browser
AA seq
1203 aa
AA seq
DB search
MSEVKLTPEQNEAIHSSGKNILVSASAGSGKTFVMAQRIVEKVKQGIEIDRLFISTFTKK
AASELRMRLERDLKKARQESSDENQARRLTLALQNLSNADIGTMDSFTQKLTKTNFNRVN
IDPNFRILADQTESDLIRQEVFEQLVESYLSEDDGLNISKEKFEELIKNFSKDRNIAGFK
KVVYTTYRFASATENPIKWLENQFLKGFETYKSLTDLSADFSADIKENLLIFFELLETSL
TNGVIAKKGAGRDKANLILDNKNELLEAITTKDFATFTELFLSIDTDIRVGSSKDEILSA
LKKDFSAQKQDLVGSKSKPGEIRKFVDKIKHGQLIEKYQNQAFEIAENLQKFVIEFYQSY
LERKKNENAFEYSDIAHFAIEILEENPDIRETLKEHYDEIMIDEYQDTSHTQERMLELLS
NGHNLFMVGDIKQSIYGFRLADPGLFLEKYKDYAKTENPNQLIRLKENFRSRGEVLTFTN
DIFKHLMDEKLGEMTYGKEEALVQGNITDYPVESEKDFYPELLLYKENTSDEETDESEVR
ISDGEIKGAAQEIKKIIEAGVEPKDIAILVRSKSNNNKIEDILLSYDIPVVLDEGRVDFL
KSMEVLIMLDVLRAIDNPLYDLSLVAMLRSPLFGFNEDELTRISTQGSHDLRFWDKILLS
LNKEGQNPELINPSLENKLKAFYKKFTEWRKLVNQVAIHDLLWKIYTETYYFDYVGALKN
GEMRQANLQALAVRAETYESSGYKGLFKFVRLINKFMEQNNDLASVNIKLPQNAVRVMTF
HKSKGLEFDYVFLMNLQSRFNDRDLKEDVILSRENGLGMKLIADLKDEADVITDFPYALV
KMETFPYMVNKDLKQRAALSEEMRVLYVAFTRAKKKLYLVGKIKETDKKSGLDLYDNASL
EGKILEDKFRNSSRGFQHWILALQNATKLPMKLNVYTKEELEAEKLEFTSQPDFKKLVEE
SEKFDNIMAYSDEIQKAQKIMNYEYPHQAATELSSIQTPSQVKKRSYEKQLQVGEIQPKS
EFTRVKKLDFSDFGPKKITAAEIGSATHSFMQYADFSQADLFSFQATLDEMGFDEKIKNQ
IDIAKILTLFDTDFGQFLSENVDKTVKEAPFSMLRTDEFAKEQYIVRGICDGFVKLTDKI
VLFDYKTDRFTSSSAISEIKERYRDQMNLYSEALKKAYDVNQVDKYLILLGGPQQVFVEK
LDD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtaaaattaactccagagcaaaatgaagccattcatagttctggtaagaat
attctagtttcagcgagtgctggttccggaaaaacttttgttatggctcaaagaattgtc
gagaaagtcaaacaaggaattgaaattgatcgacttttcatttccacatttacaaaaaaa
gcagcaagcgaattacggatgcggcttgagcgagatttaaaaaaggccagacaagaaagt
tctgatgaaaatcaagctcgtaggttgacacttgctttacagaacctgtcaaatgctgat
attggaactatggatagtttcacccaaaaattgacaaaaacgaatttcaatcgagtaaat
attgacccgaatttccgaattttagctgatcaaacagagagtgatttaattagacaagaa
gtctttgaacaattggttgagtcttatctatcagaagatgatggattgaatatttcaaaa
gaaaaatttgaagaacttataaaaaatttttctaaagacagaaatattgctggtttcaaa
aaggtagtttacactacttaccgttttgcatcagcaaccgaaaatccaataaagtggtta
gaaaatcaatttttaaaaggttttgaaacatataaatcactgacagacttgtcagcagat
ttttcagcagatataaaagagaatttactgatattttttgaacttctagaaacttcatta
accaatggagtaattgctaaaaaaggagctggacgtgataaggccaatcttattttagat
aataaaaatgaactcttagaagcaataaccactaaagattttgcaactttcacagaacta
tttttatcaatagatacagatattcgggtgggttcttcaaaagatgaaatactttcggct
ctgaaaaaagatttttcagcacaaaagcaagacttagtcggttcgaaatccaaacctgga
gaaattcggaagtttgttgataaaataaaacatggtcagttgattgaaaaatatcaaaat
caagcatttgaaatcgcagaaaacttacaaaaatttgttattgagttttaccaaagttat
ttagaacgtaaaaagaatgaaaatgcctttgagtactctgatatcgcacactttgccatc
gaaattttagaggaaaatccagatatacgtgaaactttaaaagaacattatgatgaaatc
atgattgatgagtatcaggataccagccacactcaggagcgaatgctggaacttttatca
aatggacataatctcttcatggttggtgatattaagcaatcaatttacggctttcgttta
gctgatcctggcctctttttagaaaaatataaagactatgccaagacagaaaatccaaat
caattaattcgcttaaaagaaaactttcgttcacgtggtgaggttttaacatttacaaat
gatatctttaaacacctgatggatgaaaaattaggtgagatgacttatggcaaagaagaa
gccttagttcaaggaaatattactgattatccagttgaatctgagaaagatttttatcca
gaacttcttttatacaaagaaaatacaagtgatgaagaaacagatgaatccgaagtaaga
atttcggatggagagattaaaggagcagctcaagaaataaaaaaaattattgaagctgga
gttgaaccaaaagatatagcaatcttggttcgatctaaatcaaataataataaaattgag
gatattctgcttagttacgatattccagtggttcttgatgaaggacgagttgattttttg
aaatcaatggaagtcttaattatgttagatgttttacgagcaattgataatccactctat
gatttatcattggttgcgatgttaaggtctccgttatttggatttaatgaagatgaatta
acgagaatcagtactcaaggaagccatgaccttcgattttgggataaaattcttttgtca
cttaataaagaaggacaaaatccagaacttatcaatccttccttagagaacaagcttaaa
gcattttataagaagtttacagaatggcgtaaacttgtaaaccaagttgcaattcatgat
ttactttggaaaatatatacagaaacctactattttgactatgttggcgccttaaaaaat
ggggaaatgcgtcaagcgaacttacaagccttagcggttcgagcagaaacatatgaaagt
tctggttataaaggattatttaaatttgtaagattaatcaacaaatttatggaacaaaat
aatgatttagcttctgttaatataaaacttcctcaaaatgctgttcgagtaatgaccttc
cataaatcaaaaggattagaatttgattatgtctttttaatgaatttacaatctcgtttc
aacgatcgtgatttgaaagaagatgttatcctaagtcgtgaaaatggtttaggaatgaag
cttattgctgatttaaaggatgaagcagatgttatcactgatttcccttatgctttagtg
aaaatggaaacattcccttatatggtgaataaagacttaaaacaaagagcagctctctca
gaagaaatgcgtgttttatatgttgcatttacacgagcaaagaaaaaactttatcttgtc
ggaaaaataaaagaaacagataagaaatcaggacttgacctttatgataatgcaagttta
gaaggaaagattttagaagataaatttcgtaattcaagtcgtggttttcaacactggata
ttggcgcttcaaaatgccacaaaacttccgatgaaactcaatgtctacacaaaagaagag
ttggaagcagaaaaacttgaatttacaagtcaacctgatttcaaaaaattggtcgaagaa
tcagaaaaatttgataatatcatggcttattctgatgaaatacaaaaagctcaaaaaatt
atgaattatgaatatccacatcaagcagcaacagagctttcaagtattcaaacaccaagt
caggttaaaaaacgaagctacgagaaacaattacaagtgggtgaaattcaaccgaaaagt
gaatttactcgggttaaaaaactagatttttctgattttggtcctaagaaaattactgct
gcagaaatcggttcggcaacacatagttttatgcagtatgcagatttttctcaagcagat
ttatttagttttcaagcgacacttgatgaaatgggatttgatgaaaaaataaaaaatcaa
attgatattgctaaaattttgactttgttcgatacagatttcggtcagtttttatcagaa
aatgttgataaaacagttaaagaagcaccattttcaatgttgagaacagatgaatttgct
aaagagcagtatattgttcggggaatttgtgatggatttgttaaacttactgataaaatc
gttctatttgattataagacagatagatttacaagttcttcagctatttctgaaataaaa
gagcgttatagagatcagatgaatctttatagcgaggctttgaaaaaagcctacgatgtc
aaccaagttgacaagtatctcattttattaggaggccctcagcaagtttttgttgaaaaa
ctagatgattag
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