Lactococcus lactis AI06: LG36_0596
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Entry
LG36_0596 CDS
T03480
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
llj
Lactococcus lactis AI06
Pathway
llj03410
Base excision repair
llj03430
Mismatch repair
llj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG36_0596 (recJ)
03430 Mismatch repair
LG36_0596 (recJ)
03440 Homologous recombination
LG36_0596 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llj03400
]
LG36_0596 (recJ)
DNA repair and recombination proteins [BR:
llj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LG36_0596 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LG36_0596 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LG36_0596 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AIS03196
LinkDB
All DBs
Position
627541..629769
Genome browser
AA seq
742 aa
AA seq
DB search
MIKAKYDWKVADTAISEDFLKIAKKHKLDELTSRVLYQRGIHAEAEIEQFLKPSLENLHD
PFLLHDMEKATGRILSAIEQGENILIYGDYDADGMTAASVMKSALDELGAEAQVYLPNRF
TDGYGPNLDVYQYYIKNENINLIITVDNGVAGLEAITWAQENGVDVIVTDHHSIPDQLPP
AYAIVHPEHPDSQYPFKYLAGVGVAFKVACALLEYAPSEMLDLVAIGTIADMVSLTDENR
ILVAHGLKVLAQTERAGLQELMKYAGVDFDKITEETVGFQIAPRLNALGRLDDPNPAIEL
LTGWDEDEAHEIAKMIDQKNSERKEIVEKIHNEALSMLTDEPVQILYHKDWHKGVLGIVA
GRLLEAIHKPVIMLAQEEGILRGSARSIENFDIFKALNAHRELFIAFGGHKQAAGMTLSL
ENVEAVKKAMIDYIVDNHLDMSKKSPLEIADRCHLDDISLSTITNLAKLAPFGMDNPKPR
FLIEDYKVIQSRSMGKDNAHLKLKIQEEKQQIDAVYFQHGSEELEFEQAQTKLVATLSSN
SWNGNTSLQLMIEDADSVGVELLDIRSKQIPIPKEANIFSQNQLKHGIMEDVLVIEETPG
DLAGLSVLKEAVSKAAPDDFKMIYFKNKITDSYYLTGSGTREEFARLYKAIYQFPEFDIR
YKLKSLADYLKIPHLLLVKMIKIFEELEFVSIDNGLMTVNKTAGKREISESTIYQELEKI
VKMQELFALAPVKEIYQNLLEK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagcaaaatatgattggaaagtggctgatacagccatttccgaagattttcta
aagatagcgaaaaaacataaattagatgaattgacaagtcgcgtgctttatcaaagagga
attcatgcagaagctgaaattgagcaatttttaaagccaagtttagaaaatttacatgac
ccttttctacttcatgatatggaaaaagcaacagggcgtattttatcagcaattgagcaa
ggtgaaaatatcttaatttatggtgactatgatgctgacggaatgactgcagcatcagtc
atgaagtccgctctggacgaattaggagctgaggctcaagtttatttacccaatcgtttt
actgacggttacgggccaaatcttgacgtttatcagtactatattaagaatgaaaatatc
aatcttattattactgtagataatggagttgctggcttggaggcaattacctgggcacag
gaaaatggagtggatgtaattgttaccgatcatcactcaattcctgaccaacttccccct
gcttatgccattgtccaccccgaacatcctgacagtcaatatcctttcaaatatttggca
ggagttggtgtcgccttcaaagttgcctgtgctcttttagaatatgcacccagtgaaatg
cttgatttggttgcaattggtacaattgctgacatggtcagtttgactgatgaaaaccga
attttagtggctcatggcctaaaagttttggcccaaacagagcgtgccggcctacaagaa
ttaatgaagtatgctggggttgattttgataaaatcactgaggaaacggttggttttcaa
attgctcctcgtttaaatgctttgggacgtctcgacgacccaaacccagccattgaattg
ctgacaggttgggatgaagatgaagcgcatgaaattgccaaaatgattgaccaaaaaaat
tcagagcgaaaagaaattgtggaaaaaattcacaatgaagctctgagtatgctgacagat
gaacctgttcagattttatatcataaggactggcataaaggtgtcttaggaattgttgcg
ggtcgcttgttagaagccatacataagccagtaatcatgctggcccaagaagaggggatt
ttgcgtgggtctgctcggtcaatcgaaaattttgatattttcaaggcattaaatgcccat
cgtgaactttttattgcttttggtggtcataaacaagccgcagggatgactttaagtctg
gaaaacgtagaagcagttaaaaaagcgatgattgattatatcgtggacaatcatttagat
atgtctaaaaaaagtcccttagaaattgctgaccgttgccacttagacgatatttcgctc
tcaacaatcactaatttagcaaaattggctccctttggcatggataatcctaagcctcga
tttttaatcgaagattataaggtgattcaaagccgaagtatggggaaagacaatgctcat
cttaaattaaaaattcaggaagaaaagcaacaaattgatgccgtttatttccaacatggt
tcagaagaattggaatttgaacaggcacaaacaaaattagttgcaactctttcaagtaat
agttggaatggaaatacgagtcttcaattaatgattgaagatgctgattcagttggtgtc
gaacttcttgatataagaagtaaacaaattcctatcccaaaagaggctaatattttttct
caaaatcagctaaaacatggtataatggaagatgtgcttgtcatcgaagagacacctgga
gatttagcaggtttgtcagtattaaaagaagctgtcagtaaagcagcgccggatgatttt
aaaatgatttattttaaaaataaaatcactgatagctattatttaacaggaagtggaaca
cgagaagaatttgcaagactttataaagcaatttatcaatttccagaatttgatattcgc
tataaattaaaatcacttgcggattatttgaaaatccctcatctcttgcttgtcaagatg
ataaaaatctttgaggaacttgaatttgtcagcattgacaatggcttaatgaccgttaat
aagacggctggtaaacgcgaaatttctgagagtacaatttatcaagaactagaaaaaatt
gtaaaaatgcaagaactttttgctttagcacccgtcaaagaaatttatcaaaatttatta
gaaaaataa
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