Lactococcus lactis AI06: LG36_1765
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Entry
LG36_1765 CDS
T03480
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llj
Lactococcus lactis AI06
Pathway
llj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG36_1765 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llj03019
]
LG36_1765 (recQ)
03400 DNA repair and recombination proteins [BR:
llj03400
]
LG36_1765 (recQ)
Enzymes [BR:
llj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG36_1765 (recQ)
Messenger RNA biogenesis [BR:
llj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LG36_1765 (recQ)
DNA repair and recombination proteins [BR:
llj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG36_1765 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
MC4
Motif
Other DBs
NCBI-ProteinID:
AIS04360
LinkDB
All DBs
Position
1936972..1938750
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AA seq
592 aa
AA seq
DB search
MNLEAKLKEIFGYDNFRNGQKQIIEQVLEGQATLGILPTGAGKSICYQLPALIQPGLTLV
ISPLISLMKDQVDQLNIAGIPATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDY
FNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVA
DDIQKLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKAVRYHAGLSEQERQMNQELFLFDEVPIMVATNAFGMGINKPNVRFV
IHYALPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQSEGDEAHKEHEYEK
LRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERELLDITIDAQKVLSCVVRMGE
RFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAEGYLNITSGK
FPLLLLSAQGLKVLKGQIKVCRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVP
PFMIFSDSALKEMAQVLPDSPSQFLQISGVGPVKLEKYGRLFIDKISEYKKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagctaaattaaaagaaatttttggttatgacaatttccgaaatggtcaa
aaacaaattatcgaacaagtcctagagggacaggccactcttggtattttacccacagga
gctggaaaatcaatctgctatcagttaccagctcttattcaaccaggacttactctcgta
atctccccacttattagcttgatgaaagatcaagtcgaccagctgaatattgccggaatt
ccagcaacatttattaactctaccttagaggattccgaatcttatcaaagaatgcgacag
gttgaaaatggcgaaatcaagcttctttttgtagctccagagcgtttttcattagactat
ttcaatgcctttttacaaaaacttccaattgatttagttgccatagacgaagcacactgc
atttcacaatgggggcacgatttcagacccagttatgtcgattttgcctctcatctccaa
tatttaccaacaaatcctaccgtcttagcccttacggccactgcgacaccaaaagttgca
gatgatattcaaaaacttctttcaatttcccccagtcatactattaaaaccggttttctt
agagaaaacttacgttttgaagtagtcaaagggatggataagagaacttttcttaaaaat
tatcttaaaaatcaagaaagtgaggctgctggaattatctatgccagcactcgtaaagaa
gttgaagaaatttgtgaatggctcaaccataatcatttcaaagccgttcgttaccatgct
ggactgagtgaacaggaacgtcaaatgaatcaagaactttttctctttgacgaagtgcca
ataatggttgccactaatgcttttggcatgggaatcaataaaccaaatgttcgatttgtg
attcattatgcccttcccgcaacaattgaaagttattatcaagaagctggacgagcagga
cgggatgggcttgaatctgatgctatcctccttttttcaccaaatgatttacgaattcgt
aatttcttgattgagcaaagtgaaggtgatgaagcgcacaaggaacatgaatacgaaaag
cttcgacaaatgcaagcatatacaagtgccgaaacctgtttgcaacgctatatcttgcaa
tattttggtgatgaaggtgaagattgtaaaaaatgtagtaattgtcttgatgaaagagaa
cttctcgatattacaattgatgctcaaaaagtcctatcttgtgtcgtccgaatgggtgaa
cgttttggtaagacggccgtagcacaagttttgattggttctaaaaataaaaatattgca
aaatggaattttgaatctctatcgacttttggaattatgaaaaaccattcccaaaagacc
gtaggtgaattaatcgattttctatctgctgaaggttatttaaacattacatcaggtaaa
ttcccacttctccttctttcagcccaaggattaaaagttctcaaaggacaaatcaaagtt
tgtcgcaaagctagcttaattattgaatcgaaaacaaaaatttctcatcattttgatgaa
gaatgttttgcaagtattcgtgcacttcgacttgaactagccaaggaagaaggcgtccct
cctttcatgattttttctgatagtgcccttaaagaaatggctcaagttctgccagatagt
ccaagtcaatttttacaaatttctggtgtcggacctgttaaactcgaaaaatatggaagg
ctttttatcgacaaaatatctgaatataaaaaaagctga
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